Phaseolus vulgaris (common bean): 137808078
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Entry
137808078 CDS
T03093
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvu04131
]
137808078
Membrane trafficking [BR:
pvu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
137808078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
137808078
NCBI-ProteinID:
XP_068465086
LinkDB
All DBs
Position
3:complement(44938745..44948162)
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AA seq
1434 aa
AA seq
DB search
MFSLFFLCAPKRCVLFRRKLCNFRELKSRIVLGAVVTISGELVTGAIEKVYGLGVMASNP
PLEDQTDEDFFDKLVEDDNEPVNSSHGDEGYDHSDDVKAFANLGINDDAGECRNERKQEE
GDEGGGQLDGGNAQEGGFLASSGSFGGDSAMDHGDHGTGLESASVSDVSKSNGINNSEVK
EVGWNSFNVDTKGDVGFGSYSDFFGELVEESGKACNDFNNEVKPGNEIQNDGLNSLGNYK
PCQEGQGYDTSSQVNNTNGQDLTGSQYWEDLYPGWKYDQNTGQWYMVDGHNANQGSSMAN
TAADWTTASGAISEVSYMQQTAQSVVGTLAGTNTAESVSCWNQASQGNNGYPEHMVFDPQ
YPGWYYDMIAQEWRSLETYHSFIQSAGHGQENGHASTEKKLPNDVSLYREYGQDDNYGSL
SSGIQTPDDNWSGSYGINHLQGLDRHATEMTTRNEDTATAGGNRLGHSFGSNISVNKDQQ
NNSASFETVPSYNKVNRDHGLANGTLEPQSFAPSGNVAQHFNYSNTQFDEPNNFSNEYGK
SQKPYSYSQIQPSFQDTHQSCAPHVGRSSAGRPPHALVTFGFGGKLVVMKDSSFSNSSYE
SQNFVPGSVCVLNLMEVVNGSIDLSSIGSGTGDYFRALSQQSFTGPLVGGSFGSKELYKW
IDERIAHCGSTDMDYKKCERLRLLLSLLKIACQHYGKLRSPFGTDTIRKENDTPEAAVAK
LFASTKTSGKDFTQYGVLSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQEGQLW
GPALVLASQLGDQFYVDTVKQMALRQLVSGSPLRTLCLLIAGQPAEVFSSGSSAGGDPSA
FNTPQQPTQFGSNGMLGDWEENLAVITANRTKDDELVIIHLGDCLWRERSQIIAAHICYL
VAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPY
KLIYAYMLAEVGKLSDSMKYCQAVLKSLKTGRAPEVETWKQLVLSLEDRIRTHQQGGYAA
NLAPAKLVGKLLNFFDSTAHRVVGGLPPPAPSSSSSQGNGHGNGQQHQPVANRVSNSQST
MAMSSLVPSASMEPISDWTADNNRTSKPNRSVSEPDFGRSPLQGTSPDSQGKTSVSGGTS
RFSPFGFGSQLLQKTVGLVMRPRPGRQAKLGEKNKFYYDEKLKRWVEEGVQPQSEETALP
PPPKTAAFQKGSTEYSLKSALKNEVSSSKEGYDSKTKSHEHNRGIPPIPPSTTQFSGRGR
VGVRSRYVDTFNPGGGSSAKLFQSSSVKPALAANAKFFIPAHTPSSNEQTMEAITESNHE
DSLTNEKPSTSYQSPEVLPPSARPRFPSMGNIGFQEIMTNVGNSQVPHSRRTASWGGGTI
TDLFSPSEMGESNPSGEPLGMSPSTFVPSEFSSMRTPVRSGSGSFGEVLHEVQL
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgctttttttcctctgcgccccaaaacgttgcgttttattcagacggaaactt
tgcaatttccgggagttgaaatcaaggattgtgttgggcgcggttgtgacaatctccggc
gaattggtgaccggtgcaattgagaaggtttatggtttgggcgtgatggcttcgaatcct
ccactggaggatcagacggacgaggattttttcgataaactggtggaggatgacaatgaa
cctgttaattctagccatggtgatgaaggttatgatcattctgatgacgtgaaagcgttc
gcgaatttagggattaatgatgacgctggagaatgtcgtaatgagcggaaacaggaggaa
ggggacgaaggtggtgggcaattggatggtgggaatgctcaagagggaggttttttggcg
tcctctggttcatttggaggtgatagtgcgatggatcatggtgatcatgggacgggtttg
gagagtgcttcagtttccgatgtgagcaagagcaatggaatcaacaattccgaggttaag
gaggtgggttggaattcttttaatgttgatacaaaaggcgatgtcgggtttggatcgtat
tctgacttttttggtgaattggtagaagaatctggcaaagcatgtaatgattttaataat
gaggtgaaacctggtaatgaaattcaaaatgatgggttaaattctttaggtaattataag
ccatgtcaagagggtcaaggttatgatacatcatctcaggtaaataacacaaatggtcaa
gatctgactggcagtcagtattgggaggatctttatcctggctggaagtatgatcagaac
accgggcaatggtatatggtagacggccataatgctaatcagggaagctctatggccaat
acagctgcagattggacaactgcttctggtgcgatatcggaggtttcgtatatgcaacaa
actgcgcaatctgttgttggaactttagctggaactaacacagccgagagtgtatcatgc
tggaatcaggcttcgcaagggaataatgggtatcctgaacatatggtttttgatcctcag
tatcctggttggtattatgacatgattgcccaagaatggcgctcgttagaaacttaccat
tcatttattcaatctgctggtcatggacaggaaaatgggcatgcatctactgaaaaaaaa
ttgcccaatgatgtcagtttatacagagagtatggtcaagatgacaattatgggtcactg
agctctggtattcagactccagatgacaattggagtggctcatatggtattaaccatctc
cagggtctagacagacacgcaactgagatgactactagaaatgaggatactgcaactgct
ggtggaaacagactgggtcactcttttggttcaaatatttctgttaacaaagatcaacaa
aataactctgcttcatttgaaacagtcccatcgtacaataaagtgaaccgtgatcatggt
ttggccaatggaactcttgagccacaaagctttgctcctagtgggaacgttgctcaacat
tttaattattcaaatacacagtttgatgaaccaaataatttctcaaatgaatatggtaaa
agtcagaagccctacagttactcccagatccagccatccttccaggatacgcatcagtct
tgtgcccctcatgttggaagatcatcagctggacgtcctcctcatgccttagtaaccttt
ggatttggtggaaaactggttgtaatgaaagattctagtttttcgaattcatcatatgaa
agccagaattttgtcccaggatctgtttgtgtgttaaacttgatggaggttgtcaatgga
agtattgatttatcgagcattggaagtggcactggtgattatttccgtgctctcagtcag
caatctttcactggtccattggttggtgggagttttggaagtaaagagttgtacaaatgg
atagatgagaggattgcacattgtggatcaactgacatggattataagaaatgtgaaagg
ttgagactccttctctcgttgcttaaaatagcctgtcaacattatggaaaactacgttct
ccttttggtacagacaccataagaaaagagaatgatactcctgaggcagcagttgcaaag
ctttttgcatctaccaagacgagtggcaaggacttcactcaatatggtgtgctaagtcac
tgcctgcaaaatttgccttctgaagctcaaatgcgggcgacggcttctgaggtacaaaac
cttcttgtctcgggcaaaaagaaggaggctttgcagtatgcacaagaaggtcaattgtgg
ggacctgcgcttgttcttgcttcacaacttggtgatcagttctatgttgacacagtgaag
caaatggcacttcgtcagctagtttcaggatcacctttgcgcacattatgccttctaatc
gctgggcagccagctgaagttttctcttctggtagctcagctggtggggatcctagtgct
tttaatacccctcagcagcctacacagtttggatctaatggcatgcttggtgattgggag
gagaatttggccgtaataactgcaaacagaaccaaagatgacgaacttgtaattattcat
cttggtgattgcttgtggagagaaagaagtcagatcattgctgcacacatatgctattta
gttgctgaagcgaacttcgaatcatactcagatagtgcaaggctctgtctaattggagca
gatcactggaaatttcctcgaacttacgctagtcctgaggctatccagaggactgaatta
tatgaatactcaaaggtgcttggaaactctcagtttattttgcttccatttcagccatat
aagcttatttatgcatacatgctagctgaagtgggaaagctttcagactcaatgaagtac
tgccaagcagtactcaaatccttaaaaactggtcgtgcaccagaagtagaaacatggaag
cagttggtattatctcttgaagataggattagaacccaccaacagggtgggtatgctgca
aatttggcacctgcaaaattagtgggcaaattgctcaacttttttgatagtactgcacat
agagttgttggtggtttaccaccacctgctccatcatcgtcatcatctcaaggaaatggt
cacggaaatggacaacagcaccagcctgttgcaaacagagtatcgaatagtcaatcaaca
atggcaatgtcatccttagttccatccgcttcaatggaaccaatcagtgattggacagct
gataataatagaacatcaaagcctaatagaagtgtttcagagccagactttggcagaagc
cctctccagggaacttcacctgacagtcaaggaaaaacatcagtatcggggggtacatct
cgcttttctccttttggttttggctcacaacttttacaaaagacagtaggactagttatg
agacctcgccctggtcgacaggctaaattgggtgaaaagaacaagttctattatgatgaa
aaactgaaaagatgggtagaggaaggtgttcaacctcaatctgaagaaactgcactacca
cctcctccaaagactgctgctttccagaaaggttcaactgaatacagcttaaaatctgca
ctgaagaacgaagtatcatcttctaaggagggatatgattcaaaaactaaaagtcatgaa
cataaccgagggattccaccaataccacctagcacaactcaattctctggccgaggtcgg
gttggtgttcgatctaggtacgttgacacattcaacccaggtggtggaagctctgcaaaa
ttgtttcagtcatcatctgtcaaacctgctttggctgccaatgcaaagttctttattcct
gctcacacaccatcatcaaatgagcagacaatggaagctataacagaaagtaatcatgaa
gatagtttaactaatgaaaagccttcaacgtcgtaccaatcccctgaagttttaccacca
tcggccagaccaaggtttccaagtatgggtaacatcggtttccaggaaataatgacgaat
gtcggcaactctcaagtgcctcattcaaggcgaacagcttcgtggggtggtgggactatt
actgacctatttagtccctcagaaatgggagaaagtaatccttctggtgaacctttggga
atgtcaccatcaacatttgtgcccagtgagttttcttcaatgcgtacacctgtaaggagt
gggagtggaagttttggagaagttcttcacgaggttcaactttga
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