Phaseolus vulgaris (common bean): 137809394
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Entry
137809394 CDS
T03093
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137809394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137809394
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137809394
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137809394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RE_NgoBV
Motif
Other DBs
NCBI-GeneID:
137809394
NCBI-ProteinID:
XP_068466613
LinkDB
All DBs
Position
2:complement(33868526..33869395)
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AA seq
286 aa
AA seq
DB search
MKRDSNNNMTLPCVSVMTRSVWSYNLESEFELIRSVIALYPFISMDTEFPGVVFQSHPAF
RQPQNNYAVMKANVDSMHLIQVGLTLSDRHDNLPTFGTSNRFIWEFNFCEFDVTQHPHAP
HSIALLRRQGIDFDKNRRFGVSIVRFAELMMFSGLLCNNNIQWIAFHSAYDFGYMVKILS
QRFFYMQPFLPPNLCDFLQLVKFFFGYKVYDVKHLIKFCPNLHGGLDKVSESLGLDNSCR
RSHHAGSDSLVTLHVFNKIKTLYFHTQFNLPKHAGFLYGLEIIIAN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagacagcaacaacaacatgactctcccttgcgtttctgtgatgacaagatca
gtgtggtcttacaaccttgaatcagagttcgagttgattcgttcagtcattgccttatat
cctttcatctcaatggatacggagtttcctggcgtcgtctttcagtcacatccagcattc
cgacaaccacaaaataactacgcagtgatgaaagctaacgtggacagtatgcacctcatt
caagtgggcctcaccctttcagaccgccacgacaaccttccaacctttggaacctccaac
cgcttcatttgggaattcaacttctgtgagttcgatgtgacacaacatcctcatgctcct
cactccatcgccctcctccgacgtcaaggcatagattttgacaagaatcgaaggtttgga
gtgagcattgtgcgatttgctgagttgatgatgttctcaggactcctttgcaacaataat
attcaatggattgcttttcatagtgcctatgattttgggtacatggtcaagatattgagt
caacgctttttttatatgcaaccatttctacctcccaacttgtgtgactttcttcaactc
gttaaattcttctttggatacaaagtatacgacgttaagcatctcatcaaattttgtccc
aaccttcatggcggtttagacaaagtttctgagtccctcggtttggataatagttgcaga
agaagtcatcatgcaggctccgatagcttagtcactctacatgttttcaataaaattaaa
actctctattttcatacacagtttaacttaccaaaacatgcaggttttctatatggcttg
gaaataataatcgcaaattag
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