Phaseolus vulgaris (common bean): 137809862
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Entry
137809862 CDS
T03093
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu00040
Pentose and glucuronate interconversions
pvu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137809862
Enzymes [BR:
pvu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137809862
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF5123
Motif
Other DBs
NCBI-GeneID:
137809862
NCBI-ProteinID:
XP_068467025
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Position
2:complement(2722043..2723546)
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AA seq
392 aa
AA seq
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MISGNITFSYWHFALNIIIIGILFSNFSVAKQSKIHELKMNVIDQCWRLNPKWRIQRPQL
ATCSIGYAGKMINNIGEDLVHYKVIDPSDDPINPKPGTLRYGASVIQGKVWITFQRDMHI
KLERPLLISSFTTIDGRGVNVDIAKNACLMVFKATNIIIHGIRIHDCKPQTPGVTMGPEG
KVISLGHVDGDAIRLVTASKIWIDHNTLYNCQDGLLDVTRGSTDVTISNNWFRNQDKVML
LGHDDGYVRDQNMKVTVVYNHFGPNCNQRMPRIRHGYAHVVNNLYLGWLQYAIGGSMRPS
LKSEANLFIAPTRGNKEVTWRKNNNTNGDAWEFHSVKDAFENGASFTVTKGGRVPKPNYN
EEQRFKVVDVKYVRSLTRSSGILRCTKTSLCG
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatatctggtaatattacttttagttattggcattttgctttaaacattattattatt
ggtattctcttttcaaattttagtgttgcaaaacaatctaaaatacatgaattgaaaatg
aatgtgatcgatcaatgttggagattgaatcctaaatggaggattcagcgtcctcaacta
gcaacatgttctataggctatgctggcaagatgataaacaacattggtgaagacctcgtc
cattataaagttattgaccctagtgatgatcctataaaccccaagcctggtaccttaagg
tatggagcttctgtaattcaaggtaaagtgtggattacattccaaagagacatgcatatt
aaactcgagagaccccttcttattagtagttttaccaccattgatggtcgaggagttaat
gttgacattgctaaaaatgcatgtttaatggtctttaaggccacaaatataatcatccat
ggcattcgaattcatgattgcaaacctcaaaccccaggggttacgatgggaccagaagga
aaggtgatttctctgggtcatgtagatggagatgcaataagattagttactgcttcaaag
atctggattgatcataatacactttacaattgtcaagatggtctacttgatgtaacacga
ggttcgactgatgtcactatatctaataactggtttagaaatcaagacaaggttatgctt
cttggacatgatgatggttatgtgagagatcagaacatgaaggttactgtcgtatataat
cactttggacctaactgtaatcaacgcatgccaaggattcgtcatggatatgcacatgta
gtgaacaatctttacttaggttggctgcaatatgccattggtggaagtatgagacctagc
ctcaaaagtgaagctaatctttttatagcaccaacaagagggaacaaggaggtgacatgg
agaaagaataataatacaaatggagatgcatgggaatttcattccgtaaaagacgcattt
gagaatggagcttctttcacagtaacaaaaggaggacgtgtgccaaaaccaaactataac
gaagaacaacgttttaaagttgttgatgttaaatatgtgagatcgttaacccgctcatca
ggcatattacgatgcactaaaacatctctatgtggataa
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