Phaseolus vulgaris (common bean): 137810316
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Entry
137810316 CDS
T03093
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu04120
Ubiquitin mediated proteolysis
pvu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137810316
04120 Ubiquitin mediated proteolysis
137810316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvu04121
]
137810316
Enzymes [BR:
pvu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137810316
Ubiquitin system [BR:
pvu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137810316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
FlxA
Motif
Other DBs
NCBI-GeneID:
137810316
NCBI-ProteinID:
XP_068467611
LinkDB
All DBs
Position
2:complement(3765044..3770803)
Genome browser
AA seq
541 aa
AA seq
DB search
MKLKTYAGLSFIATLAIIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVLMCILWQLT
KKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQ
KRVEYIETTPSVPMLSHVRIVSFMGFLLLLDSLFLYSSLKHLIETWQASVSLFFCFEYMI
LATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYMCFFLVIFVNYGI
PLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTT
AKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVGSQGSQADGQRQGTGPGSE
STAQNGASDNLSRHQARLQAAAAAAAIYEKSYVYPSGNSFVCSPGYTLHPPVAESTNSSG
GQTSGEHTQTQFLTAGGPTNESFPQMQHFHFLPSQPPAALVNYGKGFENDPNIPSSHLEA
HRKLLQCQIQILQNQLEILQKTRSDRSVDEGTSSSDSRGKSIVCSSGSARGYIEEIQDGK
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaaacatacgctggtcttagtttcattgcaactctggctattatctatcat
gcatttaacagtaggggtcagttttatccggcaatggtgtatctctcaacttccaagatc
agcttggtgcttcttctcaacatgggtttggtcctaatgtgtattctatggcaattaact
aagaagattttcttgggttccctccgtgaggcggaggttgagaggctaaacgagcaatcg
tggagggaggtcatggaaatcctatttgcaatcaccatttttaggcaagacttctctgtc
acatttcttgcaatggtcacggcattgttgttgattaaggctttgcattggttggctcaa
aagagagtcgagtacatcgagaccactccttcggtgcccatgttgtcgcatgttcgaatt
gtgtcttttatggggttccttcttctcttagatagccttttcttatacagttctttgaag
catttgatagaaacttggcaggcttcagtttcactattcttttgtttcgagtacatgata
ctggcaaccaccactgtgtcaatttttgtaaaatatattttctatgttagtgacatgctt
atggagggacaatgggaaaagaaaccagtcttcactttttatctggaactcattagggac
ttgcttcacttgtctatgtatatgtgcttctttcttgtaatttttgtaaactatggtatt
cccttgcaccttatacgggagctgtatgagacgtttaggaacttcaaagtccgtgttgca
gattacatacgttatcgtaaaatcacttctaatatgaatgatcgatttccagatgcaacc
cctgaagagcttaatgcaagtgatgcaacctgcattatctgtcgtgaagagatgactaca
gccaagaaacttatatgtggacatctttttcatgttcattgtctccgatcatggctggag
cggcagcatacatgccccacatgcagagccttggttgtaccaccagaaaatggaacaact
gtagggtcgcaaggatcacaggcagatggtcaacggcagggaactgggccaggcagtgaa
agcacagctcaaaatggggcttcggataatttgagtcgacatcaagccagactccaagct
gctgctgctgctgctgccatatatgagaagtcttatgtctacccttctggaaattctttt
gtatgttctcctgggtacactcttcaccctccggtggctgaatctactaatagtagtgga
gggcagacttctggcgaacatacacaaacacagtttcttacagctggtggaccaacaaat
gaatcttttcctcaaatgcaacatttccattttctaccttcccaaccacctgcagccctt
gtgaattatggaaaggggtttgaaaatgatccaaatattccaagctctcatctagaagct
catagaaaactccttcaatgccagattcagattctgcaaaatcagcttgagattctgcag
aagacaaggtctgacagaagtgtagacgagggcacatcttcatcagatagcagaggcaag
agtatcgtttgctcatctggatctgctcgtggttatattgaggagattcaagatggaaaa
gcataa
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