Phaseolus vulgaris (common bean): 137811141
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Entry
137811141 CDS
T03093
Name
(RefSeq) squalene synthase 2-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu00100
Steroid biosynthesis
pvu00909
Sesquiterpenoid and triterpenoid biosynthesis
pvu01100
Metabolic pathways
pvu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
137811141
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
137811141
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvu01006
]
137811141
Enzymes [BR:
pvu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
137811141
Prenyltransferases [BR:
pvu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
137811141
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
137811141
NCBI-ProteinID:
XP_068468858
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Position
11:complement(3629942..3636319)
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AA seq
414 aa
AA seq
DB search
MGTLRSILKHPDDFYPLLKLKIAARNAEKQIPPELHWAFCYTMLHKVSRSFALVIQQLGT
DLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD
QIHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKYEENSVKAVQCLNDMVTNALMHAEDSLIYMAALRDSSIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASVLESKVDKNDPNATKTLSRL
VAIQKSCRESGLLSKSRKSFIVKNENGYGSFMIVMLVIMVSIIFAYLSANHHNN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggactctgagatcgattctgaagcatccagatgacttttacccgttgctgaagctc
aaaatagccgccagaaacgctgagaagcagatcccgccggagctgcactgggccttctgt
tacactatgctgcacaaggtttctagaagcttcgcactcgtcattcagcagctcggcacc
gaccttcgcaacgcggtttgcatattctatctggttcttcgagcgctcgacaccgttgag
gatgacactagcatagctacagatgtcaaggtgcctatactgatagcttttcaccgtcat
atttatgatcgtgattggcacttttcatgtggcacaaaggagtacaaagttctaatggac
cagattcatcatgtttcaactgcttttctggaacttggaaagaactatcaggaagcaatt
gaggacattacaaaaagaatgggtgctggcatggccaaatttatttgcaaggaggttgaa
acaattgatgactatgatgaatattgtcactacgtggctggacttgttgggctgggttta
tcaaagctcttccatgcctctggttcagaagatctggcttctgattccctttccaattca
atgggcttgtttcttcagaaaacaaacatcattcgagattatctggaagacatcaatgaa
atccccaagtcacgcatgttctggccacgagagatttggagtaaatatgttaacaaactc
gaggatttgaaatatgaggagaactctgttaaagcagtacaatgcttaaatgacatggtc
actaatgctctgatgcatgctgaagattccttaatatacatggctgctttaagagactcg
tctatatttcgcttttgtgctataccccagataatggcaattggaacactagcgttatgt
tacaacaacattgaggtcttcagaggtgtagttaaaatgaggagaggtttaactgccaag
gtgattgaccgaacaaagactatggctgatgtctatggcgctttctttgattttgcttct
gtgttggagtccaaggttgacaaaaatgatcccaatgccacaaaaacattgagcaggctg
gtagctatacagaaaagttgcagagaatctggtctcttgagtaaaagcaggaaatcattc
attgtgaagaatgaaaatggatatggctcatttatgattgtcatgctggtcatcatggtt
tccatcatttttgcctatctgtctgctaaccaccataataactag
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