Phaseolus vulgaris (common bean): 137811150
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Entry
137811150 CDS
T03093
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03420
Nucleotide excision repair
pvu03430
Mismatch repair
pvu03440
Homologous recombination
pvu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137811150
03420 Nucleotide excision repair
137811150
03430 Mismatch repair
137811150
03440 Homologous recombination
137811150
03460 Fanconi anemia pathway
137811150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvu03000
]
137811150
03032 DNA replication proteins [BR:
pvu03032
]
137811150
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137811150
Transcription factors [BR:
pvu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137811150
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137811150
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137811150
MMR (mismatch excision repair)
137811150
DSBR (double strand breaks repair)
HR (homologous recombination)
137811150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
DUF223
zf-CCHC_3
zf-CCHC_2
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
137811150
NCBI-ProteinID:
XP_068468874
LinkDB
All DBs
Position
2:27120519..27124313
Genome browser
AA seq
866 aa
AA seq
DB search
MAGSLTPGAIKEICGANCSSGLKPVLQVIDLKLVQSQQASNTERYRLVLSDGSFYQQGML
ATQMNELVHSGKLQKGSVVRLVQFICNDVQNRKIIVIIDLDVVVEKCELIGEPVALPKDG
PAESSTGQSGVTPGNSQPLNNRSHSGGVTARPNMAVPSPDHPRVNASSVYTGISNSGSSY
SSNAPPTYPKVESGVNSRSAPFTGSHGDQSSGIGHPQSEASRSFPNSYARPPQPMYRQPS
PMYNNRGPMGKNEAAPRIIPIAALNPYQNMWTIKARVTAKGELRHYNNARGDGKVFSFDL
LDSDGGQIRATCFNSVADQFYNLIEAGKVYLVSRGSVKPAQKNFNHLPNDQELTLDMTSI
IQPCPDDDNSIPKQTFNFRPISEIESLESNTIVDVIGVVTSISPTASIMRKNGTETQKRT
LQLKDMSGRSVELTLWGNFCNVEGQKLQNICDDGAFPVLAAKAVRINDFNGKSVGTIMTS
LLFVEPDFQEAYTLKRWFENEGKSVPTLSISRDTSNFPKNDNRKTVSQIKDEKLGTSEKP
DWISVCATISYIKYDNFCYPGCPIMIGDRQCNKKVTNNGDGKWICDRCNQSVDACDYRYI
LSFQIMDHTGVTWVTAFQESGEEIMGVPAKDLYYLKYEEQDDVRFAEIIRKILFTEYVFK
LKVKEETFSDEQRVKSTVVKAEKVNYASKSRVSLELIDKLLTGKSEGTTTVPNSLSGNAG
QGSVETRQVTPSAYNTIKSSTNSSRDFGMPANQVGQQYGNQYGNFGSAGAPSAYTSCTNC
GGSGHTSMLCPNIRNLPGQSSGGGFSNRASYGGSGGGASGECFKCHQPGHWARDCPGSSA
PTASYGSANTMQGRYGIAQNQQFGGY
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtcactgacgccaggggcgataaaggaaatatgcggtgccaattgttccagt
ggtttgaagccggttttgcaagttatagatttgaagctagtgcagtcgcaacaagccagc
aacaccgagaggtaccggctggttctctccgacggttccttttaccagcaaggcatgctt
gccacgcagatgaacgaactggttcattccggaaagttgcaaaaaggttccgttgttagg
ctcgttcagtttatctgcaacgatgtccagaaccgcaagattattgttataattgaccta
gatgttgttgtggaaaaatgtgagttgattggagaacctgtcgcgttaccaaaagatgga
cctgcagaatctagcactggtcaatcaggagtcacccctggaaattcacaacctttgaat
aaccgttcacactcaggcggcgtgactgctagaccgaacatggctgtaccatctccagat
catccaagagtgaatgccagtagtgtttatactggtatttctaactctggatctagttat
tccagcaatgcacctcctacatatcctaaagtagaatctggagttaattctagatcagca
cctttcactggatctcatggtgatcagagctcgggtattggtcatccccaatctgaggct
tcaaggtcctttccaaactcttatgctcgtccacctcagcctatgtatcggcagccatct
ccaatgtacaataacagagggccaatgggaaaaaatgaagctgcccccaggataattcca
atagcagcattgaatccttaccagaatatgtggacgattaaagccagggtaacagctaag
ggagaactcaggcactataacaatgctcgaggtgatggcaaggtgttttcatttgacctt
ttggattctgatggtgggcaaattcgggcaacttgcttcaatagtgtggctgatcagttc
tataatttaattgaagctggtaaggtatacctagtttccaggggaagcgtaaagccagct
cagaagaatttcaatcaccttcccaatgaccaagagctaactcttgatatgacatcgatt
atacagccatgccctgatgatgataactcaattccaaaacagacttttaattttcgcccc
attagtgaaattgaaagtttggaaagcaacacaattgtggatgtgattggtgtggtaact
tcaattagtcctacagcttcaatcatgagaaaaaatggtactgaaactcagaagagaaca
ctccagttgaaagacatgtctggccgaagtgttgagttaactttgtggggaaatttttgc
aacgtggaaggacaaaagctgcaaaatatctgtgatgatggggcatttccagttttggct
gcaaaagctgtcagaattaatgatttcaatggaaagtctgttgggactataatgactagc
cttctgttcgtagagcctgattttcaagaggcttacacacttaaaagatggtttgaaaat
gaagggaagagtgtcccaactctctctatttctagggatacatctaattttcctaagaat
gataatcggaagactgtatctcaaattaaagacgagaagttagggacttcagagaagcct
gattggatatctgtctgtgcaactatttcatacattaagtatgataacttctgttaccca
ggatgtcctatcatgataggggataggcaatgtaacaaaaaagtgactaataatggtgat
ggaaaatggatttgtgataggtgtaaccaatctgttgatgcttgtgattataggtacata
ctgtcattccagataatggatcacacaggtgtaacatgggttactgctttccaggagagt
ggtgaggagatcatgggcgtgcctgcaaaagatttgtattatctgaagtatgaagagcaa
gatgatgtaagatttgctgaaatcatccggaagattctcttcaccgagtatgtgttcaag
ttgaaagtaaaggaggagacattcagtgatgaacaacgcgttaagtcaacggtagttaaa
gcagaaaaggtaaactatgcatccaaatccagagttagtttggaattgattgataaactc
ttgactgggaaatcagaaggtactaccaccgttccaaactctttatccggtaatgctgga
caggggagtgttgaaactagacaagtaacgccatcagcttataacacaataaagagtagc
actaatagcagtagagattttgggatgccagcaaatcaagtcggtcaacagtatggaaac
caatatggcaattttggttcagcaggtgctcctagtgcatatacttcatgcaccaactgt
ggaggttctggtcatacttctatgctttgcccaaatattagaaatctgcctggacagtct
tcaggtgggggcttttccaacagggcatcatatggtggatcaggtggcggtgcttctggt
gaatgcttcaaatgccatcaacctggccactgggcaagagactgtcctggttccagtgca
ccaactgcatcatatggaagcgctaatacaatgcagggaagatatggtatcgctcaaaac
caacagtttggaggatattga
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