Phaseolus vulgaris (common bean): 137811812
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Entry
137811812 CDS
T03093
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
137811812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137811812
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
137811812
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
DUF1464
Motif
Other DBs
NCBI-GeneID:
137811812
NCBI-ProteinID:
XP_068469746
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All DBs
Position
2:complement(37242854..37247832)
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AA seq
686 aa
AA seq
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MPPIKDALLLLLDVGPSMHYVLPEIEKACSLLVQKKLVFSKNDEVGIVLFGTEDTDNELT
TEVGGYQHVVVLKNTKVVDGDIVEALQHLPRGTTDGDFVDAVIVGMNLLIKKFGQTNKGK
KRICLITNAQCPIKESYEGTKEEQVTTIAKQLTAHGMKMESIIVRGKLSQDANKGIMDEN
DRLLNIFSKETSTRLLYLENPISLFGALKTRNITLVTVFRGDLEISPKLSIKVMVYKKTA
EEKFPTLKKYTDKAPPNDKFATREVKIDYEYKSSEDPDKVVVPPDQRIRGYPYGPQIVPL
STSHWDAFKFLPEKGVKLLGFTDSSNVFRHHYMKDVYVFLPQPGNTRAMLAVSSLARAMK
EMDKVAILRCVWRQGQANVVIGVLTPNLSDKENIPDSFYLNVLPFAEDVREFQFHSFSNF
PASWLPNGQQLEAAANLVKALDLAPDGQEEVLLPDFTANPVLERFYRFLEQKSKDPDIAV
PPLDDTLKKITEPDADLLLQNKSVIDSFCRSFELKGNPLKKSRRLFGGKRSFSNDEEIKE
NITAEPPNLIENASVKVEKIGDLTPAQDFEALISRRDSPDWVVKAINEMKNKIFDLVEDS
HEGDNYPKALECLVVLRKGCILEQEPKQFNDFLKHLCNFCQEKSLHSFCQYLASKDLTLI
SKTEAVDSDVTDEEARSFLVKSEPKS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaatcaaggatgcgttgcttttgctgcttgatgtgggcccatccatgcattat
gttcttcctgaaattgagaaagcctgctccttgcttgtgcaaaagaagttggtctttagc
aaaaatgatgaagtgggaatagtcttatttggaactgaagacactgataatgaacttact
acggaagtgggtgggtatcaacatgttgtggttttaaaaaataccaaagttgtggatgga
gatattgttgaggctttacaacatctacctcgaggaacaactgatggtgattttgttgat
gctgtcattgttggcatgaatttgttgataaaaaaatttggacaaacaaacaagggaaag
aagcgtatctgtcttattacaaatgcacaatgtccaataaaagaatcttatgaaggcaca
aaggaagagcaagttaccaccattgccaaacaactgactgcccatggtatgaaaatggaa
agtattattgttagaggaaagcttagtcaagatgcaaacaagggaataatggatgagaat
gatcggttgttaaatattttttcaaaggaaacatcaacaagattgttgtatttggagaat
ccaatttctttgtttggtgctcttaaaacaagaaatataactctagttacagttttcaga
ggggatcttgaaatcagtccaaaattgagcattaaggtaatggtttacaagaaaacagca
gaagagaaattccctactctgaagaaatatactgataaggctcctccaaatgataaattt
gctacacgtgaagtcaaaatagattatgagtacaagagttctgaagatcctgataaagtt
gtcgtcccccctgaccaaagaattagaggctatccttatgggcctcaaatagttccctta
tccacttctcactgggatgcttttaaattcctaccggaaaagggtgtgaaacttctggga
tttactgattcttctaatgtatttagacaccattacatgaaagatgtatatgtgttccta
ccacaacccggaaatacaagagccatgcttgcagtttcttcacttgcacgagccatgaag
gaaatggataaggtggcaatattacgttgtgtctggagacagggacaagcaaatgttgtc
attggggtcttgacgcctaatttatccgataaagaaaatattcctgattcattttactta
aatgtacttccttttgctgaggatgtgcgagagtttcaattccattccttctctaatttc
ccagcttcgtggctgccaaatggacaacagctagaggctgcagctaacttagtaaaagcg
cttgatcttgcaccagatgggcaagaggaagttttgctccctgactttacagcaaatcca
gtgttagagcgcttttatcgattcctagagcagaaatcaaaggatccagatattgcagta
cctcctcttgatgacacactcaagaaaatcacagagcctgatgctgacctgctcttgcaa
aacaaatctgttatagactcattttgcaggtctttcgagctaaagggaaatccgttgaaa
aagtctaggcgtttatttggaggaaagagatctttttcaaatgatgaagagattaaagaa
aatattactgctgaacctcccaatctaattgaaaatgcatctgttaaagttgagaaaatc
ggggatctgactcctgcccaagattttgaagccttgatttcccgcagagatagtccagat
tgggttgtaaaagcaatcaatgaaatgaaaaataaaatatttgacctggtggaggactcc
cacgaaggcgataactatcctaaagcattggaatgtctagttgtgcttcgcaagggttgc
atccttgagcaggaaccaaaacagttcaatgatttccttaaacatctatgtaatttctgt
caagagaaaagccttcacagtttctgtcaatatcttgcttctaaggatctcaccttgatc
tccaaaacagaagctgtagacagtgatgttactgatgaggaagccagaagtttcttggtt
aaatctgaaccaaaaagttga
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