Phaseolus vulgaris (common bean): 137812191
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Entry
137812191 CDS
T03093
Name
(RefSeq) elongation factor 1-alpha isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137812191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137812191
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137812191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
Vps36-NZF-N
DZR
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
137812191
NCBI-ProteinID:
XP_068470209
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Position
2:41604297..41612222
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AA seq
788 aa
AA seq
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MPRKVNYGLDLDDDYYYDDDYDDYDYDSVDAEDSGGPDTKQETIRPGLWQCPICTYDNED
SMTFCDICGVVRRPLPNIGASDNSKIAEDISKTPGVSKLARSLFHSLPQQIPKEVVLFPK
PGDGFLTDASISYKLENVRGEFHEIHKDFSTQIHPHLNIDPFKFNVPSPDDVVYTGLHSS
KMGLKDKVTNKKSSKLSSSVREINDHSVQSNAESSDNLSSLMQKSRRDSSAESKLSKNIA
TDVQTSGKTSNSLPESLPKDKGENINKIKSLKNGTIDIQSSKEKSGSLSALSKVKESDKN
SFSSIKDGKQGSISSNFNMTVDVRSGNSGHTNAKEPRSHVSYKPEKWMLPQQAEDTLTQL
NLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKNEKEAKLQGKGSFAYAWALDESSEERE
RGITMTVAVAYFDTKKYHVVLLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMD
GNKGQTREHAQLIRSFGVDRVIVAVNKMDAVAYSNDRFNFIRKQLGGFLHSCGFKESSLS
WIPMSAMENQNLEASPSDTRFKNWYDGPYLLDAIDSLEAPTREFSKPLLMPVCDVIKSTM
LGQVSACGKLEAGALRSGSKVLVMPSAVVGTVRSLERDSNACTVARAGDNVAVTLQGVDG
NQVMAGDVLCHPDFPVAAAQHLELKVLVLDGASPILVGTQLEFHIHHAKEPARVSRIVSV
LDPKTGKVTKKSPRCLIAKQSAVIEVVLHKSVCVVEFSGCKALGRVSLRSMGRTIAVGVV
TRIIEDEG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaagtcaattacggactcgatttggacgacgactattactacgatgatgat
tatgacgactatgattatgattctgtcgatgcagaagactctggaggacctgatacaaag
caagagaccattaggccaggtctttggcaatgccccatatgcacttatgacaatgaggac
agtatgacattttgtgatatttgtggtgttgtacgtcgacccttgcctaacatcggagct
tccgacaatagcaaaatagctgaagacataagcaaaactcctggagtatccaagttggct
aggtctctttttcattcattaccacaacagattcccaaagaggttgtattatttccaaag
ccgggtgatggttttctgacagatgccagtatctcctacaagcttgagaatgtccgggga
gaatttcatgaaattcataaagattttagtactcagatccatccgcacttaaacatagat
cctttcaagttcaatgttccatcccctgatgatgttgtttatactggtctgcattcttcc
aaaatggggttgaaagacaaagttacaaacaaaaaaagttcgaaactttcatcaagtgtc
agagagataaatgatcattctgtacaatcaaatgctgaaagttcagacaacttatcatcc
ttaatgcaaaagagcaggcgggatagttcagctgagagcaaactttcaaaaaatatagca
actgatgtgcaaacaagtggtaaaacttcaaacagcttgccagaatctctgccaaaagac
aaaggtgaaaatattaataaaataaagtctttgaaaaatggtacaattgatattcaatca
agcaaagagaagtcaggcagtttgtctgcactgtcaaaagtcaaggaaagtgataagaat
agtttctcttctatcaaagatggaaaacaaggaagtatttccagcaatttcaacatgact
gttgatgtaagatctggaaattcaggccatactaatgctaaggaacctcgttcacatgtt
tcttataagccagaaaaatggatgctacctcaacaagctgaagatacactgactcagctg
aatcttgcaattgttggccatgttgattctggaaaatcaaccctatctggtaggttactg
cacctattgggacgtatttccaagaaagagatgcacaaaaatgaaaaggaggccaagtta
cagggcaagggatcttttgcttatgcttgggcacttgatgaaagttctgaagaaagagaa
aggggaattactatgacagttgctgttgcttattttgacaccaagaaatatcatgttgtt
ttgctcgactctcctggccataaagattttgttccaaacatgatttctggggcaacacaa
gctgatgctgcaattcttgttatagatgcctcacttggttcatttgaagctggtatggat
ggcaacaaagggcaaacaagggagcatgcacaacttatcagaagttttggtgttgatcgg
gtcatagttgctgtaaataagatggatgctgttgcgtactccaatgatcgatttaatttt
ataaggaagcagctgggaggttttctgcactcatgtggtttcaaagaatcttctctatct
tggattcccatgagtgccatggaaaatcaaaatttggaagcatccccttccgacacccgt
ttcaaaaactggtatgatggaccttatctgttagatgcgattgactctctcgaagctcct
actagagaattttcaaaacctctactaatgccagtatgtgatgtcatcaaatcaactatg
cttggacaggtatctgcttgtggtaaactggaagcaggagctcttcggagtggatcaaag
gtcttagttatgccttcagctgtagtgggaacagtacgctcattggagcgtgactccaat
gcctgtactgtcgcaagagctggagataatgtagctgtaacattgcaaggtgttgatggg
aatcaggtgatggcaggagatgtactatgccatcccgactttcctgttgcagctgctcag
catttggagttgaaagtgctagtgttggatggtgctagtccaatattggtgggcacacag
ttggagtttcatatacaccatgcgaaggaacctgctagagtttcaagaatagtgtcagta
ctcgatcccaagactggtaaggtgactaaaaagtcgcctcgctgtctcattgcaaagcaa
agtgcagtaattgaggtggttttgcataagtcggtctgtgtggtagagttctctggttgt
aaagctcttggaagggtgtccctaagatccatgggaagaacaattgctgttggagttgtg
acaagaataattgaggacgaaggttaa
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