Phaseolus vulgaris (common bean): 137812428
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Entry
137812428 CDS
T03093
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19026
spatacsin
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137812428
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
137812428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
137812428
NCBI-ProteinID:
XP_068470496
LinkDB
All DBs
Position
2:complement(43715141..43752326)
Genome browser
AA seq
3203 aa
AA seq
DB search
MDFPLGSEDPAILQLHNWDPSETRIGLSDFREAFISPTREILLLHSHGREALLLPLGKGE
FLSGGAEGGDGYDIHNPGSSNVSLEASSRPSCSVLINDSPCTSGSDIVTDLTGTKCSRSN
SYPFISDVNSLTWARCEDGYDQHNDASFTEVLFVSGRCGVTVHAFPKLTKTNGMDQASLE
GNFRKGRWVEWGPIATLSSNISHGVSGGENVNLMGGDDGVEPLSGSATKRYLESFFTKVE
TIVSDGILCTKFPENNGFPCSTKVVSFSIFRGRLSLDHLLGEKSVQSKGNGQEPVDSDTK
FDIFSSVFGIVANGFYECPKVFSSASYCLVGFYFTLIHDDSVNISDANQSCRNRNLLLVA
QVHSWGIQWVSTVKLDERINIAQAVEWMDFQFSDNLLVCLNSSGLIVLYSAMSGEYVTHL
NVSQACGLNPHFDLQGLENLYSNDDIYARKECGIEDNMSDRKSDSFRRSFKRLVVASHTS
LLAVVDEYGVIYVISLGEYILDKKYSSEKLLPHCQQFGLGMLVGWGVGGSDLDLYSNLSG
YFQSSDLNIKYGSVASSDKAVAGNALQNINGCALKEKGDLYSFHSSGFSATSKVNNGHKF
HGYDVKSPVMRKILIPNFRVCEDDSICFSPLGITIFSRTKCLKDQNGSQLIHFNLQMKLE
VHDDNFLDSVYDEVYHFDGKDVAGEAIGCTFQGCFYIVREGGLSVYIPSISISPNFFPVE
YIGYCQSSKDIGISVLLKDNLEIKEQTKRFSPWKVEVLDRVLLYEGTEVAEQLCLKNGWD
IKVSRIRQLQIALDHLKFYEIERSLEMLVDVDLAEEGILRLLFAAVCLILNKSGNDNETS
AASRLLALATCFATKMLHKYGMLQHKKDTCIAESCNKTKLLPLPPIEPIKLQTEVDFTQK
LREISHFLEIIRNLQCRHRSIFQRASQGLADSGKESSLTSTNMIQEDSHLSILPSDLESL
DVLNQHEMSFPLPGSDNNEHLALVPVDSDSHLVTDEFGNISDLTSLEGILHKKVLPVENP
REMMARWKVDNLDLKTVVKDALLSGRLPLAVLQLHLFHQLNDFVADGEPHDTFTEIRDIG
RAVAYELFLKGETELAVATLQRLGENIESCLKQLLFGTVRRSLRTQIAEEMKRYGYLGPY
EWKILDDMSLIESLYPSSSFWKTYNHRLKDTSNPSGSVLPVENQLRLLHNHSFDSHVIEC
GEIDGIVFDTWINISESSSAIEVDEDDAPVGYWASAAVWFDAWDQRTVDRMILDQPFHSS
NSILWDSQLEYHVCRNNWKEVFRLLNLIPAYVLSAGSLQLNLDVLQPASSYGGNINMKSS
NYGSFLCSFEELDSVCMQVPDVQMFRFSPDICFGWMRMLMEENLAKRFIFLKEYWEGTLE
ITALLARSGFISCKDKLCEEDDLNKTSSVRDGAVQALHKIFVHHCAQYNLPNLLELYLDQ
HNLVLDNDSLYALQETTVDCEWARWLLLSRVKGCEYEASLANSRSIMSRDLVPRSDLSVL
ELDEIIRTVDDIAEGGGEMAALATLMHAAVPIQNCLNSGGVNRHSNSSAQCTLENLRPTL
QKFPTLWRTLVGACLGQDTMALLVPKAKTALSDYLNWRDEIFFSTVRDTSLLQMLPCWFP
KPIRRLIQLYVQGPLGCQSFSEFPIGETLLRRDIDLFINADVHAEISAISWEATIQRHIE
ELYGPLLEENGFGVEHLLHRGRALAAFNQILGHRVQNLKSEEESSTSAHGQTNIQSDVHS
LLSPLGQSEETLLSCVLPTAIMHFEDSMLVASCAFLLELCGLSANKMHVDIAVLKRISSF
YKSIENNENLRQLSPKGSVFHAISHEGDLTESLARALAEEYLQKDSPVTATETRAVGKQP
SRALILVLHHLEKASLPRLVDGKSYGSWLLSGNGDGSELRSQQKIASQHWTLVTNFCRFH
GLPLSTKYLAVLARDNDWIEFLSEAQIGGYSFDTVVQVASKEFSDPRLRLHMLTVLRGMQ
SKKKASSALFLDTLEKDSETTFPDENMCVPVELFQILAECEKQKSPGEALLRKAKELSWS
ILAMVASCFLDVSPLSCLTVWLEITAARETSSIKVNDIASQIADNVGAAVNATNALPVGD
RVLTFHYNRQSPKRRRLITPVSLESSASAISDISRTSTSGKIFDSLGKAVENDRKVENIG
CINVPSDSDEGPASLSKMVAVLCEQQLFLPLLRAFEMFLPSCPLLPFIRALQAFSQMRLS
EASAHLGSFSARIKEEPMYLQPNVGRETQIGASWISSTASTAADAVLSTCPSPYEKRCLL
QLLAATDFGDGGYTAAYYRRVYWKINLAEPLLRKDNELHLGDDEILDDASLLSALENNRH
WEQARNWAKQLEAIGAPWKTATHHVTESQAESMVAEWKEFLWDVPEERVALWNHCHTLFI
RYSFPSRQAGLFFLKHAEAVEKDLPAKELHELLLLSLQWLSGMISLSNPVCPLQLLREIE
TKVWLLAVESETQVKSEGDFNFTFSTRESGIKNDSSIIDRTASIISKMDNHINTFKSRTV
EKYESRENNQIPHKNFVIDAGLSTTVGGNSKIKRRSKGYMASRRPPLESADKSADTDDVS
STINLKNELQLQDENIKVEMSFSRWEERVGTAELERAVLSLLEFGQIAAAKQLQYKFYPG
QIPSEFRLVDAALKLAGNSTPPSNVSVSILDEEVRSVMQSYGILNKKHHVDPLQVLESLV
TIFTDGSGRGLCKRIIAVIKAANTLGLSFSEAFNKQPIELLHLLSLKAQDSFEEANFLVQ
THPMPAASIAQILAESFLKGVLAAHRGGYMDSQKEEGPAPLLWRFSDFLKWAELCPSEPE
IGHSLMRLVITGQEIPHACEVELLILSHHFYKSSSCLDGVDVLVALAATRVDAYVLEGDF
PCLARLITGVGNFHALNFILGILIENGQLDLLLQKYSAAADTNTGTAEAVRGFRMAVLTS
LKHFNPNDLDAFAMVYNHFDMKHETAALLESRAEQSCEQWFRRYNKDQNEDLLDSMRYYI
EAAQVHSSIDAGNKTRKDCAQASLLSLQIRMPDFQWLYRSETNARRALVDQSRFQEALIV
AEAYNLNQPSEWALVLWNQMLKPEVMEEFVAEFVAVLLLQPSMLIDLARFYRAEVAARGD
QSHFSVWLTGGGLPAEWAKYLGRSFRCLLKRTRDLKLRMQLATVATGFGDVIDACAEEMD
KVPDNAAPLVLRKGHGGAYLPLM
NT seq
9612 nt
NT seq
+upstream
nt +downstream
nt
atggattttcccttgggcagtgaggatccagctatacttcaattgcacaattgggacccg
tctgagacccggattgggctttcggactttcgtgaagcttttatttctcctacaagagag
atactgcttttacattctcatggaagggaggctcttttgcttcctttgggtaaaggagag
tttctttctggtggtgctgaagggggtgatggttacgatatacacaatccagggtcatct
aatgtttccttggaggcatcctctaggcctagttgttcagttttgataaatgattcacct
tgcacttcaggatcggatattgttactgatcttactggaactaaatgttcaaggtccaat
agttacccattcattagtgatgtgaactcattgacctgggcacgatgtgaggacggctat
gatcagcacaatgatgcttcatttacagaagttctatttgtttctggaagatgtggggta
acagtccatgccttccccaaactaactaaaaccaatggaatggatcaagcctcgttagag
ggtaactttaggaaaggcaggtgggtggaatgggggcccattgctacattatcttctaac
attagtcatggagtctctggaggtgagaatgtaaatttgatgggtggagatgacggagtt
gaaccattaagtggctctgctactaagagatacttggagtcatttttcacaaaagttgaa
actattgtatctgatggtattctatgcaccaaattccctgagaataatggatttccttgc
tccacaaaagtggtttcttttagcatatttcgtggaagactatctttggaccatctcctt
ggagaaaaatcagtccaaagcaagggaaatgggcaggaaccagttgattcagatactaag
tttgatattttttccagtgtatttggcattgtggctaatgggttctatgaatgccccaaa
gtgttctcaagtgcttcatattgcttggtaggattttattttacattaatccatgacgat
tctgtcaatattagtgatgcaaatcaaagctgcaggaacagaaatttacttcttgttgcc
caagtacatagttggggtattcagtgggtttcaacggtgaagcttgatgaaagaataaac
attgctcaggcagttgagtggatggatttccaattttctgataatcttcttgtttgtctt
aattcctctggattgattgttctctattctgcaatgtccggtgaatatgtgacacactta
aatgtttcacaggcatgtggacttaatcctcattttgatttgcaagggttagaaaatctg
tattcaaatgatgatatatatgctagaaaggagtgtggcattgaggataacatgtctgat
cggaagagtgattcatttaggagatcattcaagaggttagttgtagcttctcatacctcc
cttttagctgtggttgatgaatatggtgtgatctatgtgatatctttgggggaatatatt
cttgacaaaaagtactcatccgagaagttgcttccacattgtcagcaatttgggttggga
atgttagttggctggggagttggtggttctgatcttgatctatactctaatttatctgga
tattttcaatcaagtgatttgaacataaaatatggaagtgttgcttcctcagacaaagct
gtggcaggtaatgcacttcagaatattaatggctgtgcattaaaagaaaagggggatttg
tatagcttccattcaagtggtttttctgctacttctaaagtaaataatggtcacaaattt
catggatatgatgtcaaatcacctgttatgagaaagatactcattcccaattttagagta
tgtgaggatgattctatttgtttttctcctttgggaattactattttctctaggacgaag
tgtttaaaggatcaaaatggttctcaacttattcattttaatctgcaaatgaagttagaa
gtccatgatgacaacttcttagacagtgtatatgatgaagtataccactttgatggaaaa
gatgttgctggagaagcaattggttgcacattccaaggatgtttttatattgtgagagaa
ggtggtctatctgtatatattccgtccatttcaatttctccaaatttttttcctgttgag
tacattggttattgccaatcaagtaaggatatagggatttcagttctgctaaaagacaat
ctagaaataaaagaacaaacgaaaaggttttctccttggaaagttgaagttttggacaga
gtacttctgtatgaaggcactgaagtggcagagcagttatgtttgaaaaatggatgggac
atcaaagtatctcgtattcgtcagttacaaatagcattggaccacttgaaattttatgaa
atagaaagatctttggaaatgcttgtggatgttgatctagcagaagaggggattctgaga
ttgctttttgctgcagtgtgtcttatacttaataaaagcggtaatgataatgagacttct
gctgcttcaaggcttcttgctctggccacttgctttgcaacaaagatgcttcataaatat
gggatgttacaacataaaaaagatacatgcatagcagagagctgtaacaagaccaaatta
cttcctctaccaccaattgaaccaattaaactacaaactgaagtggattttactcagaaa
cttcgtgagatatctcatttcttggagataatccgaaatctgcaatgtaggcatagatca
atatttcaaagggccagtcaaggattggccgacagtggaaaagagtcatctttaacaagt
acaaatatgatacaggaagattcccatctttcaattcttccatcagatttagagtcattg
gatgtgttgaaccaacatgaaatgtcgtttcctctaccaggcagtgacaataatgaacat
cttgccctggtgcctgttgattctgattctcatttggttacagatgaatttggcaacata
tctgatttaacctcattagaaggaattttacacaagaaagtgttgcctgtggaaaatcct
agagagatgatggcacgctggaaggtcgataacctagaccttaaaactgtggttaaagat
gctttgctctctggtcgtcttcctttggcagttctgcaactgcatctttttcatcaattg
aatgattttgttgctgacggagagcctcacgacacatttactgaaattcgtgacattggc
agagctgttgcttatgaattatttctgaagggtgaaactgaacttgctgttgctacactt
caaagacttggagagaacattgaatcctgtcttaaacaactgctgtttggcacggtaaga
agatccctgcgcacacagattgctgaggaaatgaagagatatggttatctaggaccatat
gagtggaagatattggatgatatgtcactaattgagagtctctatcctagcagtagcttc
tggaaaacatataatcaccgattgaaagataccagcaatccatcaggctctgttttacca
gtggaaaatcaattgaggctcttgcataaccattcatttgatagtcatgtcattgaatgt
ggtgagatagatggaattgtgttcgacacatggattaatattagtgaaagctcatctgcc
attgaagttgatgaggatgatgctcctgttggatattgggcttctgctgctgtctggttt
gatgcctgggatcaaagaacagttgatcgtatgatattggatcaaccttttcattcaagc
aattctatactgtgggattcacaacttgaataccatgtttgccgtaacaactggaaggaa
gtctttagactgttgaacttgatacctgcatacgtcctatcagctggaagccttcaactc
aatttggatgttttacagcctgcctcatcttatggaggcaatataaatatgaagtcttct
aattatggaagtttcttgtgctcttttgaagaattggattctgtatgcatgcaagttcca
gatgtccaaatgtttaggttttcaccagacatatgtttcgggtggatgaggatgcttatg
gaggaaaaccttgcaaaaagatttatatttctgaaagaatattgggaagggacattggag
ataacagctctcttagctcgttcaggtttcatatcttgcaaagataagttatgcgaagag
gatgatcttaataagacttcatctgttagagatggagctgtacaagctttgcataaaata
tttgtacaccattgtgcacaatataacttgccaaatcttttggagctttaccttgaccag
cacaatctggtcctcgacaacgattcactttatgcattacaggaaactacagttgattgt
gaatgggcaagatggctactcttatcgagagttaaggggtgtgaatatgaagcctcactt
gccaattctcgatcgataatgtcacgtgatttagttcctagaagtgatctcagtgttctg
gagttagatgaaataattcgaactgtcgatgacattgctgaaggagggggagaaatggca
gccttggcaaccctaatgcatgctgctgtcccaattcaaaactgcttaaacagtggtggt
gtaaatcggcatagtaattcctctgcccagtgcacattggagaaccttaggccaactttg
caaaagttccccacattgtggcgcacacttgttggggcatgtcttggacaagatacaatg
gccttgctggtccctaaagcaaaaactgctttatcagactatcttaattggcgtgatgag
atcttcttctctaccgtacgtgatacttcacttttacaaatgcttccttgctggtttcct
aagcctatacgaagattgatacagctttatgtccagggtcctcttggatgccaatcattt
tctgagtttcctattggggaaactttgctacgcagagacatcgatttattcataaacgct
gatgtacatgctgagataagtgcaatctcttgggaggccactatccaaagacacattgaa
gaactatatggtcctttacttgaggaaaatggatttggggttgagcatcttttgcatcgt
ggacgagcactggcagcttttaaccaaattcttggccacagagttcaaaatttgaagtca
gaagaggaatctagtacttcagctcatggacaaacgaacattcaatcagatgttcattca
cttctttctccactaggacaaagtgaagagactctactctcatgtgttttgccaactgct
attatgcattttgaggattccatgcttgttgcttcatgtgcttttcttttggagttatgt
ggtctatctgccaacaaaatgcacgttgatattgctgtgctaaaacggatatcttcattt
tacaaatcaattgaaaataatgaaaatctcaggcagttatcccctaagggttctgtgttt
catgcaatatcccatgaaggtgatttaacagaatctcttgctagagctttagctgaggaa
tatttgcaaaaggattctcctgtaactgctactgagacaagagctgtaggtaaacaacct
tcacgagcacttattcttgtcttgcaccatctggaaaaggctagccttccacgtttggtt
gatggaaaaagttatgggtcatggctattaagtggaaacggtgatggaagtgaattaaga
tctcagcaaaagattgctagtcagcactggactttggtaacaaatttttgtagatttcac
gggcttccattaagtaccaaataccttgctgtattagccagagacaatgattggattgaa
tttttgtctgaagcccagattggaggatattcatttgatacagtagtccaagtggcatca
aaggagtttagtgatccacgtctccgacttcatatgttaacagttttgaggggaatgcag
tcaaagaaaaaggcaagctctgcattgttcttggatactctagagaaagacagtgaaaca
acctttcctgatgaaaacatgtgtgttccagttgaactcttccaaatattagcagaatgt
gaaaagcaaaaatctcctggagaggctctcttgaggaaagcaaaagagttgtcctggtcg
atattggctatggtcgcttcatgtttccttgatgtctctccattgtcatgcctcacagtt
tggttggaaattactgcagcaagagaaacttcatccattaaggtgaatgatattgcttcc
cagatcgcagataatgttggagctgctgtaaatgctactaatgccctgcctgtaggtgac
agagtacttacatttcattacaacaggcagagtccgaaacgacgacggttgataactcct
gtttcgcttgaatcctctgcttctgcaatatctgatatctctcgcacttctacaagtgga
aaaatatttgattcccttggtaaagctgtggagaatgatagaaaagtagaaaatattgga
tgcattaatgttccaagtgattccgatgaaggacctgcttccctttcaaagatggttgca
gtgctttgtgaacaacaattgtttttgcctctgctcagggcatttgagatgttccttcca
tcgtgccccttgctcccattcatccgtgctcttcaagcattttcacaaatgcgcctttca
gaagcttctgcccatttgggttctttttctgcacgaattaaggaggaaccaatgtactta
cagccaaatgtaggaagagagacacagattggggcatcgtggattagttctactgcttca
acagctgctgatgctgtgctttcaacctgcccatctccttatgaaaaaagatgcctactg
caacttcttgctgctactgactttggtgatggtggatatactgcggcttactatcgaagg
gtttattggaaaattaatttagccgagcctttacttcgtaaagataatgagttgcatttg
ggtgatgatgaaattttagatgatgcttcacttttatctgcactagagaacaataggcac
tgggagcaggcaaggaactgggccaagcagttggaggccattggtgcaccctggaaaact
gctacgcatcatgttactgaatctcaggctgaatctatggtagctgaatggaaggagttt
ctttgggatgtgccagaagagagggttgcattatggaaccactgccatacactcttcatc
agatattccttcccttctcgacaagctggtttattttttcttaaacatgctgaagctgtt
gagaaggatcttcctgcaaaggagcttcatgaacttttgttactttctctgcaatggctg
agtgggatgataagtctttccaaccctgtctgtccattgcaacttctgcgtgaaattgaa
accaaagtatggctcttagccgttgagtctgagactcaggtgaagagtgaaggtgatttc
aattttaccttttctacgagggagagtggtatcaagaacgactccagtattattgaccga
actgcaagcataatatcaaagatggacaaccatataaatacatttaagagtagaactgta
gaaaaatatgagtccagggaaaataaccaaatccctcacaagaattttgtgatagatgct
ggtctttcaactactgttggtgggaattcaaagattaaaagaaggagcaaaggatacatg
gcatcaaggcgcccacctcttgaatcagcagataaaagtgctgatactgatgatgtctct
agtactattaatttaaaaaatgagctgcagttgcaagatgaaaacattaaagttgaaatg
tccttttctagatgggaggaaagggttggaacagcagagctggaaagggctgtactttct
ttattagaatttgggcaaattgctgccgccaagcaactgcaatacaaattctatcctgga
caaataccatctgagtttagacttgttgatgcagccttgaagcttgctggtaattcaact
cctcctagcaatgtatcagtgtcaatccttgatgaggaagtgcgttcagttatgcagtca
tacggtatactgaataaaaagcaccatgttgacccactgcaggttttggagagtttggtg
acaatttttactgatggcagtgggcgtgggctatgtaagagaataatagcagttataaaa
gctgcaaacaccttgggcctctcattttctgaggcattcaacaaacaaccaattgaactg
ctacatctcctttctcttaaagcacaggattccttcgaggaggccaactttctggtgcag
actcatccaatgccagcagcaagtattgctcaaatactcgcagaatcttttctaaagggt
gtgttggctgcacatcgtggaggatatatggattcacaaaaggaggaagggcctgctcct
ttgctgtggagattttcagacttcttgaagtgggcagagctttgtccctctgaaccagaa
attggccattctttaatgcgtttggtgattactgggcaagaaataccacatgcttgtgag
gttgagcttctcattttatctcaccacttctacaaatcatcttcttgccttgatggagtt
gatgttcttgtggcccttgctgcaactagggttgatgcttatgtcttggagggtgatttt
ccatgtttggcgcgcctgataactggagttggaaattttcatgctctaaatttcattctt
ggcattcttatagaaaacggtcaattggatcttcttcttcagaagtactctgctgctgca
gacacaaacactggaactgctgaggctgtcaggggatttcgaatggctgttcttacatcc
ttgaagcatttcaaccctaatgaccttgatgcatttgccatggtctacaatcattttgat
atgaagcacgagacagcggctcttttagagtcacgtgcagagcaatcatgtgagcagtgg
ttccgccgctacaacaaggaccaaaatgaagacttactggattctatgcgctactacatt
gaagctgctcaagttcactcttctatcgatgctggcaataaaacacgtaaagattgtgct
caggcttcccttctgtcccttcaaatacgaatgccagatttccaatggctttatagatca
gaaaccaatgccagacgagcgttagttgatcagtctcgatttcaagaagccctgattgta
gccgaagcttataacctgaaccagccaagtgaatgggctttagtactctggaaccagatg
cttaaaccggaggtaatggaggagtttgtagctgaatttgttgcagttttgcttcttcag
ccttcaatgctgattgatttagctagattctatagagctgaagttgcggccagaggggac
caatcccatttctctgtctggctcacagggggaggattgcctgcagaatgggctaaatat
ttaggaagatcattcagatgcttattgaagcgaacaagggatttgaagttgcggatgcag
ttggctacagtggcaactggatttggggatgtcattgatgcatgcgcagaagaaatggat
aaggtccctgacaatgcagcgcctctagtgctgaggaagggtcatggtggagcttacctc
cctttaatgtga
DBGET
integrated database retrieval system
