Phaseolus vulgaris (common bean): 137813411
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Entry
137813411 CDS
T03093
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137813411
Transcription machinery [BR:
pvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137813411
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
137813411
NCBI-ProteinID:
XP_068471737
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Position
1:6941879..6947047
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AA seq
538 aa
AA seq
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MGLTLNPNRLRYCVPLHTPHSFTNSPVSLSPSSAGVKETCFNCTKLSLPTTSYEEGEALQ
KDFGRVYAFSALDTLENESLGREETGVNKGKRSLSGVHEMFDDTQMPFGEVSSVSKKFES
FTPQHFRLLMKNLDVLEEAFADSEALRLEKAIRLQLEKLGALEIFNVYLSLVTDYADKVH
NKGKCVVPSSKKKQNKTRRKREIGVTAVSSQSLTLKVNQEDLLGFSVSVVKRATNSKNKR
MMVAKREAEMAKGVKVLAELEKIRTALEEDTKRVVCLNHWAEASGVDEKVLQQLLHHGYY
CRDELVRSSRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYW
IRKSILRVVERYSRGVIIPWSLNRAIKQIQKARKVLKSTHKKSPDDCEIAKMTGLSLDKI
KSASNCLRIVASIDQKVGNFSIEYNELLPDTTIESPENGVLKQHMKKDVHDLLKGLNSRE
RQILSLRFGLIDNQPKSLQDIGTLFKVSKERIRKIEKIALTKLRNEATTSDLHYYLDL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggactcacgctaaaccccaacagactcagatattgcgtgcctcttcatacccctcat
tccttcaccaattcacctgtttctctttctccatcttctgctggagtcaaggagacttgt
ttcaactgcacgaagttgtctttgccgacaacatcttatgaggaaggagaagctttgcag
aaagattttggaagggtttatgcattttctgctttggataccttggaaaatgagtcatta
ggaagagaagaaaccggggtaaataaagggaagaggtcactgagtggtgtacatgaaatg
tttgatgatacccaaatgccttttggagaggtatctagtgtgtctaagaagtttgagtca
ttcacgccacagcatttccgtttgttaatgaagaaccttgatgttttagaagaggctttt
gccgattcagaagcactgaggttggaaaaggctattagattgcaactagaaaagcttggt
gctctcgagatattcaatgtttatctatcacttgtgacagactatgctgataaagtacat
aacaagggcaaatgtgttgtcccctctagcaagaaaaagcaaaataaaactagaagaaag
agagaaattggtgtcacagcagtttcatcacagtcattgactttaaaagttaatcaggaa
gatctattaggattctcagtttcagttgtgaaaagagcaacaaatagtaaaaataaaaga
atgatggttgctaaaagggaggcagagatggcaaaaggtgtaaaggtgctagctgagtta
gagaaaattaggacagctttagaagaggataccaagcgagtagtgtgcttgaatcactgg
gccgaagcatctggagttgatgagaaggtgctacagcagctattgcatcatggctattat
tgtcgggatgagctcgtacggagttctcgttccttagttctataccttgccagaaaatac
aggggtatgggaatagctttggatgatttacttcaggcaggatatgtaggtgttctccaa
ggagctgagagatttgacagtacaaggggatacaaattctcaacctatgtgcagtactgg
ataaggaaatcaattttaagagtggtggaacgatattctcgaggagtcataattccttgg
tcattaaacagggcaataaagcaaatccagaaagctcgaaaagtcctgaaaagtacacac
aagaaaagcccagatgattgtgaaattgcaaagatgacaggtctttcactagataaaatc
aaatcagctagcaattgtctgagaatagttgcttcaattgatcagaaggtggggaatttt
agcatagaatataatgaacttcttcccgatacaacaatcgagagccctgaaaatggtgtc
ctgaagcaacatatgaaaaaagacgtacatgatcttctgaaaggcttgaactcaagggaa
aggcaaatattaagcctacgctttggccttattgataaccagcccaagtctctacaggat
atagggacgcttttcaaagttagcaaagagaggataagaaaaatagagaaaattgctcta
acaaagttaaggaatgaggcaaccacctcagatttacattattatttggatctgtag
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