KEGG   Phaseolus vulgaris (common bean): 137813411
Entry
137813411         CDS       T03093                                 
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
  KO
K03093  RNA polymerase sigma-I factor
Organism
pvu  Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    137813411
Transcription machinery [BR:pvu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     137813411
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3
Other DBs
NCBI-GeneID: 137813411
NCBI-ProteinID: XP_068471737
LinkDB
Position
1:6941879..6947047
AA seq 538 aa
MGLTLNPNRLRYCVPLHTPHSFTNSPVSLSPSSAGVKETCFNCTKLSLPTTSYEEGEALQ
KDFGRVYAFSALDTLENESLGREETGVNKGKRSLSGVHEMFDDTQMPFGEVSSVSKKFES
FTPQHFRLLMKNLDVLEEAFADSEALRLEKAIRLQLEKLGALEIFNVYLSLVTDYADKVH
NKGKCVVPSSKKKQNKTRRKREIGVTAVSSQSLTLKVNQEDLLGFSVSVVKRATNSKNKR
MMVAKREAEMAKGVKVLAELEKIRTALEEDTKRVVCLNHWAEASGVDEKVLQQLLHHGYY
CRDELVRSSRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYW
IRKSILRVVERYSRGVIIPWSLNRAIKQIQKARKVLKSTHKKSPDDCEIAKMTGLSLDKI
KSASNCLRIVASIDQKVGNFSIEYNELLPDTTIESPENGVLKQHMKKDVHDLLKGLNSRE
RQILSLRFGLIDNQPKSLQDIGTLFKVSKERIRKIEKIALTKLRNEATTSDLHYYLDL
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgggactcacgctaaaccccaacagactcagatattgcgtgcctcttcatacccctcat
tccttcaccaattcacctgtttctctttctccatcttctgctggagtcaaggagacttgt
ttcaactgcacgaagttgtctttgccgacaacatcttatgaggaaggagaagctttgcag
aaagattttggaagggtttatgcattttctgctttggataccttggaaaatgagtcatta
ggaagagaagaaaccggggtaaataaagggaagaggtcactgagtggtgtacatgaaatg
tttgatgatacccaaatgccttttggagaggtatctagtgtgtctaagaagtttgagtca
ttcacgccacagcatttccgtttgttaatgaagaaccttgatgttttagaagaggctttt
gccgattcagaagcactgaggttggaaaaggctattagattgcaactagaaaagcttggt
gctctcgagatattcaatgtttatctatcacttgtgacagactatgctgataaagtacat
aacaagggcaaatgtgttgtcccctctagcaagaaaaagcaaaataaaactagaagaaag
agagaaattggtgtcacagcagtttcatcacagtcattgactttaaaagttaatcaggaa
gatctattaggattctcagtttcagttgtgaaaagagcaacaaatagtaaaaataaaaga
atgatggttgctaaaagggaggcagagatggcaaaaggtgtaaaggtgctagctgagtta
gagaaaattaggacagctttagaagaggataccaagcgagtagtgtgcttgaatcactgg
gccgaagcatctggagttgatgagaaggtgctacagcagctattgcatcatggctattat
tgtcgggatgagctcgtacggagttctcgttccttagttctataccttgccagaaaatac
aggggtatgggaatagctttggatgatttacttcaggcaggatatgtaggtgttctccaa
ggagctgagagatttgacagtacaaggggatacaaattctcaacctatgtgcagtactgg
ataaggaaatcaattttaagagtggtggaacgatattctcgaggagtcataattccttgg
tcattaaacagggcaataaagcaaatccagaaagctcgaaaagtcctgaaaagtacacac
aagaaaagcccagatgattgtgaaattgcaaagatgacaggtctttcactagataaaatc
aaatcagctagcaattgtctgagaatagttgcttcaattgatcagaaggtggggaatttt
agcatagaatataatgaacttcttcccgatacaacaatcgagagccctgaaaatggtgtc
ctgaagcaacatatgaaaaaagacgtacatgatcttctgaaaggcttgaactcaagggaa
aggcaaatattaagcctacgctttggccttattgataaccagcccaagtctctacaggat
atagggacgcttttcaaagttagcaaagagaggataagaaaaatagagaaaattgctcta
acaaagttaaggaatgaggcaaccacctcagatttacattattatttggatctgtag

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