Phaseolus vulgaris (common bean): 137813429
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Entry
137813429 CDS
T03093
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137813429
Transcription machinery [BR:
pvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137813429
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
137813429
NCBI-ProteinID:
XP_068471776
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Position
1:7309475..7314338
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AA seq
511 aa
AA seq
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MGVVTVSTSAARTPLRLSTKLISLQQAHKRLLIVAFKGNKLNKTTLVSPKEQIPLPLETA
KKHRKRIGKTNDSVKRVRAVSTDETTPFTLDVDYNEAAAKLENIYKLSSVSSTCDTEDID
SKTKRVLRRRKNVGDEHDDRNDGSVVRNQNKKAKRLSLDKRIALKRNPKQEVIVQAQKKR
DVNRIENIDALIREYSASTDLVSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELLQVREDL
QEVGKEISDGELADANSISVIQVRKALEVGQAARNKLIKHNLRLVLFVINKYFQDFASGP
RFQDLCQAGVKGLITAIDRFESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVPFGLDRVR
ADIHRAKLELRFELQRSPTEKEVVERIGISPERYYDVLKASKPIISLHSRHIVTQEEFIN
GITDLDGVDGDNRRQLAVLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEIAGNLN
ISREMVRKHEVKALMKLKHPARLDYLRRYVV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttactgtttctacctcagctgctaggactcccttaagattgagtacaaag
ttgatcagtcttcagcaggcacataaacgactcttaattgtagcttttaaaggaaataaa
ttgaataaaaccactttggtttcacctaaggagcaaattcctctacccttagaaacggca
aagaaacaccggaaaaggataggaaagactaatgattcggtgaagagagtgagagctgtc
tctactgatgaaaccacaccattcaccttggatgtggactacaatgaagctgcagccaaa
cttgaaaatatatataaactcagctctgtatctagtacttgtgacacggaagatatagat
agtaaaaccaagagagtattgcggaggaggaagaacgttggtgatgaacatgatgacaga
aatgatggtagtgtggttagaaaccagaataagaaggccaaacgattgagtcttgataag
aggattgcattgaaaaggaatccaaagcaggaggtgattgttcaagctcagaagaaaaga
gatgttaatagaatagagaatattgatgcgcttatcagggaatattcagcatcaactgat
ttagttagcatggactggaagaaaatcaaaattccgccagttcttccttcttcagaacat
gcatggttatttaagttgatggaacctatgaaggaactcctacaagtgagagaagattta
caggaagtagggaaagaaatttcagatggtgaactagcagatgcaaacagcattagcgtt
attcaagtaaggaaagctctagaggttggtcaagctgcgagaaacaagctcataaagcac
aatctccggcttgtattgttcgtgattaacaaatattttcaagattttgcaagtggtcca
aggtttcaagatctttgtcaggctggagttaagggacttatcactgcaattgatcgattt
gagtcaaaaaggagacttcagctatctacatacagtctattttggattagacattcaatt
gttcgttccataaccctctcaagcctcacacgtgttccttttggacttgacagggttaga
gcagatatccatagagcaaaacttgagttaagatttgagctccagaggtcaccaacggaa
aaagaggtagtggaaagaattgggatctcccctgaaagatattatgatgtattgaaggca
tcaaaacccattatatcccttcattcaagacatatagtgacgcaagaagagtttattaat
gggattactgatcttgatggtgtggatggtgataataggaggcaacttgctgttctaaga
cttgctcttgatgatgtgcttgattccttgaagccaaaggaaagcttagtgatgagacag
agatatggacttgatgggaagggtgacagaacgttgggagaaatcgctgggaatttgaat
atttcgagggaaatggttcggaagcatgaagttaaggctctcatgaagctgaagcaccct
gctcggttggattatctccgtcgctatgttgtataa
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