Phaseolus vulgaris (common bean): 137813883
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Entry
137813883 CDS
T03093
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137813883
03036 Chromosome and associated proteins [BR:
pvu03036
]
137813883
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
137813883
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
137813883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HTH_44
HHH_9
HHH_3
SH2
Motif
Other DBs
NCBI-GeneID:
137813883
NCBI-ProteinID:
XP_068472450
LinkDB
All DBs
Position
1:complement(29926989..29936597)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAKGVISDEEDDVELDEEEREPIDGEELEEGRDVDNEDEDEEEEGEDAYENDGFIVDDIE
DEEEQDEEERADSDDERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKK
GRRDTEEEPSGLSDEEEFVGSGKVGRTAEEKLKRSLFGDDEGAPLEDIAEEEEQGEEEED
ADIGEDDEMADFIVDEEEVDENGAPMRQRKLKKKKTRQAPGVSSSALQEAQELFGDPDEL
ILNRQKNLEMSEYRETRLEDEFEPIVLSEKYMTEQDDQIRELDIPERMQISDESTGAPPL
DGSSIDEESQWIVNQLGNGAVPWISKKISNSQNNEKDGLPINKDDIIRFLELHHVQKLDI
PFIAMYRKEECLSLLKDLEQPEAGDENDKTPTLKWHKVLWALQDLDKKWLLLQKRKSALE
SYYSKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPGEAG
VDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSPEQLGLCLTVVNLQELEDPKETPEEMA
SNFTCAMYDTPEEVLKCARHMAAVEISCEPSIRKHVRSHFLDHAVVSTCPTADGNTAIDS
FHQFAGVKWLREKPLSKFEDVQWLLIQKAEEEKLIQVTIKLPEEYLNKLIDQFNEYYISD
SVSRSAQLWNEQRKLILHDAIFRFLLPSMEKEARGVLASKAKNWLLMEYGKALWNKVSVG
PYQQKENDLGSDDEAAPRVMACCWGPGKPLTTFVMLDSSGEVLDVLYTGSLTFRSQNVND
QQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGHEMDG
LSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPRKEIMS
WKLSPLESFLNQDDKFAIVEQVMVDVTNQVGLDINLAISHEWLFAPLQFISGLGPRKAAS
LQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHP
ESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYASGKKRQNK
IQTFYDIKRELIQGFQDWRNQYEEPSQDEEFYMISGETEETLAEGKIVQVTVRRVQAQKA
ICGLESGMTGILMKEDYTDDWRDVIELSDRVHEGDMLTCKIKSIQKNRYQVFLVCKDSEM
RSNRLQNNRDIDPYYHEDRSCFQSDQDKARKEKELAKKHFKPRMIVHPRFQNITADEAME
FLSDKDPGESIIRPSSRGPSYLTLTLKISDGVYAHKDIVEGGKEHKDITSLLRIGKTLKI
GDDTFEDLDEVMDRYVDPLVAHLKTMLNYRKFRKGTKSEVDELLRIEKAEYPMRIVYSFG
IAHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSA
PSIRSVAAMVPMRSPAAGGSSGPSVGGGWGGGSNSEGGRRGHSYDRDRSSTPGSRTGRGE
YRNNGNQDEHPSGVPRPYGGGRGRGRGRGSYNNRGHNNNERQDSGYGGSRWGSNNTKDSD
DGLSSFPGAKVQNSPGREAFPGGWGGGSGGGNGGGSGGWGGGSSGGSGGGNGGGNGGGNG
GGSGGWGGGSGGANNNDNGVWGQETGGPSDGDQGSSGWGAAPKKAAAGNGWGSGNSGGW
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggcgtaatctcagacgaagaagacgacgtcgagctcgacgaggaagagagg
gaacccattgatggggaagaattggaagagggtcgcgatgtggataacgaagatgaagac
gaagaagaggaaggggaagatgcatatgaaaatgatggatttattgtggatgacattgag
gacgaagaggagcaagatgaagaagagagagcagacagtgacgatgagcgacaaaagaag
aaaaagaggaagaaaaaggaagagtatgtccttgatgaagatgattatgagttgctggag
gacaataatataaatattcatcggcggaaggagagcaaaaagttcaagcggctgaaaaaa
ggccggagggacactgaggaggagccctctgggctgtctgatgaggaggagtttgttgga
agtggtaaagttgggcgaactgctgaggagaagcttaaacgcagtttatttggggatgat
gaaggagctccacttgaagacattgctgaagaggaggaacaaggagaagaagaagaggat
gctgacattggagaagatgatgaaatggccgacttcattgtggatgaagaagaagttgat
gagaatggagctcctatgaggcagaggaaactgaagaagaagaaaaccaggcaggctcct
ggagtctcttcctcagctctacaagaagctcaagaattatttggtgatccagatgagttg
attctgaatcgccagaaaaatcttgaaatgagtgaatacagagagactagacttgaagat
gaatttgagcctattgttctgtctgagaaatatatgacagagcaggatgatcaaattagg
gagcttgatattccggagagaatgcagatatcagatgaaagtactggtgccccgccattg
gatggaagtagtatagatgaagagagtcaatggatagttaatcaacttggaaatggagca
gtcccttggatttccaagaagatctcaaactcccaaaataatgaaaaggacggcctaccg
atcaacaaggatgatattatcagatttttggaactgcatcatgtgcaaaagttagatatc
ccttttatcgcaatgtatcggaaggaggaatgcttaagcctattaaaagacctggagcaa
cctgaagctggtgacgagaatgacaagacacctactctgaaatggcacaaggttctttgg
gctctacaggacttggacaagaagtggttgctgcttcagaagcggaagagtgcccttgag
tcatactatagtaaacgttttgaagaagagtcccgtcgcgtgtatgatgaaacgagacta
aacttaaatcgtcaattgtttgaatcagtcatgagatcactgaaggaagcagagtctgag
agggaggttgatgatgttgactccaagttcaacttgcatttcccaccaggtgaagctggt
gttgatgaagggcaatacaagaggccgaaaaggaagtcaatgtatagcactttcagtaag
gcaggtctatgggaggttgcgagcaggttcgggtgtagtcctgagcaacttggattatgt
ctaactgtagttaacctgcaagagttggaagatccaaaggaaacacctgaggagatggct
tctaacttcacatgtgctatgtatgatactcctgaagaagtacttaaatgtgccaggcac
atggcagctgttgagataagttgtgagccaagcattaggaaacatgttcgtagccacttt
cttgatcatgcagttgtgtcaacttgtcctactgctgatggaaatacagcaatagattct
ttccatcagtttgctggggtgaagtggctgcgggagaagccattgtctaagtttgaagat
gtgcaatggctcctcattcagaaggccgaagaggagaaactcattcaagttactattaag
ttgcctgaggagtatcttaataagttgatagaccaattcaacgagtattatattagtgac
agtgttagcagatctgctcaactgtggaacgaacagaggaagttgatactgcatgatgcc
atttttcgattccttttaccatcaatggaaaaagaggcaagaggtgtattggcaagtaaa
gcaaagaattggttactcatggagtatgggaaggcattatggaataaggtttctgtggga
ccttatcaacagaaggaaaatgatctgggatcagatgatgaggctgctccaagggtaatg
gcatgctgttggggccctggaaagccactaacaacttttgtcatgttagattcatcagga
gaagtgttagatgtgctttacaccgggtcccttacttttaggtcacaaaatgttaatgac
caacaacggaaaaagaatgaccaggaacgagtgttgaagtttatgacggatcaccaacca
catgttgttgttttaggagcagttaacttgtcttgcacccgtttgaaggaagatatatat
gaggttatttttaagatggttgaggaaaaccctagagatgtggggcatgaaatggatggg
ctcagcattgtctatggagatgaatctcttccccgtctttatgaaaattctagaatttcc
tcagaacaacttccttcacagcaaggaatagtgaggcgggctgttgctcttggccgttat
ctccagaacccattggcaatggttgcaaccttatgcggacctagaaaggaaatcatgtca
tggaaattgagccctttagagagttttctcaaccaagatgataaatttgcaattgttgag
caggttatggtagatgtgaccaatcaggttggcttagacattaatttagcaataagtcat
gagtggttatttgctccattacaatttatttctgggcttggtccaaggaaggccgcatcc
ttacagagatctttggtaagagctggtgccatttttacacggaaggactttctcacagaa
cataaacttggtaaaaaggtgtttgtcaatgcggttggtttcttgcgtgtccggcgaagt
gggttggctgctagcagcagccaatttattgatttgctggatgatacaagaattcatcct
gaatcttatattcttgcacaagagttggccaaagatgtgtatgaagaagatggaacaggt
gatgcaaatgatgatgatgatgcactggagatggccatagagcatgtgagagaccgacct
agttatttgaaaaaccttgatgttgaggaatatgcttctgggaaaaaacgtcagaacaaa
atacaaactttctatgacataaaaagagaattaattcaaggttttcaggactggcgaaat
caatatgaagaaccaagtcaggatgaggaattctatatgatttcaggtgagactgaagag
acccttgctgaaggtaaaattgtccaagtcacagttcgaagagtacaggctcagaaagca
atatgtgggctcgaatctggaatgactggaatcctcatgaaggaagactacacagatgac
tggagagatgtaattgaattatctgatagggtacatgaaggtgacatgctcacttgtaaa
atcaagtcaattcaaaagaatagatatcaagtcttccttgtttgtaaggacagtgaaatg
agaagtaatcgattacagaataatcgtgatattgacccctattaccatgaagaccggagt
tgctttcagagcgatcaagacaaagctcggaaagaaaaggaacttgcaaagaagcatttt
aagccaaggatgattgttcatccacgcttccagaacataactgcagatgaagcaatggag
ttcttgtctgacaaagatcctggagaaagtattatccgtcctagttcacgaggaccttca
tatcttactttaactcttaaaattagtgacggagtatatgcccataaggatatagtcgaa
ggtgggaaggagcacaaggacattacgagcttactccgaattgggaagacactaaaaatt
ggtgacgacacttttgaggacttagatgaggttatggaccgttatgtagatccgttggtg
gctcacttaaagacaatgctaaattatcgcaaatttcgaaagggtacaaaatcagaagtt
gatgaacttttgaggatcgagaaagctgagtatcctatgcgcattgtctatagttttggc
atcgcccacgagcatcctggcacatttatattaacttatataagaagtacgaatccacac
cacgagtacattgggctttacccaaaaggattcaggttcaggaaaaagatgtttgaggac
atcgatcggcttgtggcatattttcaaagacatattgatgatccccagcacgattcagcc
ccctcaattagatcagttgctgctatggtaccaatgcgtagccctgcagctggtggctcg
tctgggccatctgttggcggtggctggggtggtggttcaaacagtgagggtggtaggaga
ggtcattcttatgatagggatcgatcttctactcctggttccaggacaggacgtggtgag
tatagaaacaatgggaatcaggacgaacatcctagtggggtgcctcgtccatacggtggt
ggacgaggacgtggtcggggtcgaggttcttataacaacagaggacacaacaacaatgaa
aggcaggactctggttacgggggcagcaggtggggttctaataatacaaaggattcagat
gatggtttaagcagttttccgggggccaaagttcaaaattctcctggaagggaagctttt
cctggtggttggggtggtggaagtggtggtggaaatggtggtggaagtggtggttgggga
ggtggaagtagtggtggaagtggtggtggaaatggtggtggaaatggtggtggaaatggt
ggtggaagtggtggttggggaggtggaagtggtggagctaataacaatgacaatggtgtc
tggggacaagagactggtggtccaagtgatggtgatcaaggaagctccggttggggagct
gcccccaagaaagcagcagctgggaacggatgggggtctggaaattctggcggttggtga
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integrated database retrieval system
