Phaseolus vulgaris (common bean): 137814068
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Entry
137814068 CDS
T03093
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu00040
Pentose and glucuronate interconversions
pvu01100
Metabolic pathways
Module
pvu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137814068
Enzymes [BR:
pvu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
137814068
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF5552
Motif
Other DBs
NCBI-GeneID:
137814068
NCBI-ProteinID:
XP_068472709
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Position
1:complement(37340438..37343218)
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AA seq
459 aa
AA seq
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MALLKHLLLSLPIFIISFVFCHATLQEDPLTSIYVHHSPSTDNGGTLFKNFNKQSINLLS
LNRLEKRSSLRKVNVNDYGAEGSGDTDDSEAFKKAWDVVCSSGEAILVVPEENYLLKPIR
FSGPCKPNIEVQISGTLEASDDPSDYKEDSSHWLVFENIKKLFVYGGGTIDGNGKIWWKN
SCKRNKKRPCKDAPTALTFDNCEDLIVENLNIENAQQMHVSFQDSENVKVSGLNVIAPED
SPNTDGIHVTNTQNIQISDSVIGTGDDCISIVHGSKNVEATNITCGPGHGISIGSLGAGK
SKEIVSGILVNGAKIFGTKNGVRIKTWQGGSGSASDIQFQNIEMENVTNPIIINQNYCDK
KKKPCKKRLLQKSAIQIKNVLYQNITGTSSSDIAVKFDCSEKFPCQEIKLQNIDLKCEDG
DDAEAWCNNVELSYLGHVKPRCNSENIFTTFWKYFSWYI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccctccttaaacacctcctcctctctctccccattttcatcatttcttttgttttt
tgtcatgccaccttgcaagaggacccacttaccagtatatatgttcatcattcaccttcc
actgataatggtgggacattattcaagaacttcaacaagcaaagcataaatcttttgagc
ttaaacaggttggagaagcgtagctcccttagaaaggttaatgtcaatgattatggagct
gaggggagtggtgatactgatgactcagaggctttcaagaaggcttgggatgtggtatgt
tcttctggggaagcaattcttgtggtgcctgaggagaattatcttctcaaaccaatcaga
ttctctggcccttgcaaacctaacattgaagtgcagatttctggaacccttgaagcatca
gatgatccatcagattacaaggaagacagcagtcactggcttgtgtttgagaatattaag
aaactgtttgtttatggtggtggaaccatcgatggaaacggcaagatatggtggaaaaac
tcatgcaaaaggaacaaaaagcgaccatgcaaggatgctccaacggctctgactttcgat
aattgtgaggacttgatagttgagaacctgaacatagaaaatgctcaacaaatgcacgtt
tcattccaagactccgagaatgttaaggtttctggccttaacgtgattgcaccagaggat
agcccaaacaccgatgggattcatgtcacaaatacgcaaaacatccaaatctcagattct
gtcataggaactggtgatgattgcatatctattgtacatggatctaaaaatgtagaagct
acaaatattacatgtggacctggtcatggtatcagtattggaagcttaggggccggaaaa
tccaaggaaattgtttcaggaatattagtgaatggagccaagatttttggaaccaaaaat
ggagttagaatcaagacatggcagggaggttcaggaagtgctagtgacatccaatttcag
aacattgagatggagaatgtgaccaatcccataataataaatcagaattactgtgacaag
aagaaaaaaccatgcaaaaaacggcttttgcagaaatccgctattcaaatcaagaatgtg
ttgtaccagaacataactggtacaagttcttctgatatagctgtgaagtttgactgcagt
gagaagtttccgtgccaagagataaaattgcagaacatagaccttaagtgcgaagacgga
gatgatgctgaggcttggtgtaacaatgttgaattatcttacttaggacacgttaagcct
cgttgcaattcagaaaacatttttaccaccttttggaaatacttttcatggtatatatga
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