KEGG   Phaseolus vulgaris (common bean): 137814192
Entry
137814192         CDS       T03093                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03018  RNA degradation
pvu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137814192
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137814192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137814192
   03041 Spliceosome [BR:pvu03041]
    137814192
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137814192
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     137814192
Spliceosome [BR:pvu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    137814192
 Complex C
  U2 snRNP components
    137814192
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C DUF1256
Other DBs
NCBI-GeneID: 137814192
NCBI-ProteinID: XP_068472884
LinkDB
Position
1:39543332..39545920
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcgtacttcaaggatttggtgggaagagaagtaaccgtggagctgaag
aacgatttggccatcagagggacattgcattccgttgatcagtacctcaacataaagctc
gaaaacactcgcgtcgtcgatcaagacaagtacccccacatgctttctgtaagaaactgc
ttcatcagaggttcggtagtgagatatgtgcaattacctccagaaggggtggacattgaa
ttgttgcacgatgccacgaggagagaggctcggggcggttag

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