Phaseolus vulgaris (common bean): 137814453
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Entry
137814453 CDS
T03093
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic-like
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu00300
Lysine biosynthesis
pvu00470
D-Amino acid metabolism
pvu01100
Metabolic pathways
pvu01110
Biosynthesis of secondary metabolites
pvu01230
Biosynthesis of amino acids
Module
pvu_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
137814453
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
137814453
Enzymes [BR:
pvu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
137814453
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
137814453
NCBI-ProteinID:
XP_068473312
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All DBs
Position
1:complement(43412997..43417654)
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AA seq
487 aa
AA seq
DB search
MAGSHLLSHSQSLTKTYNHSFNQNPLTQKLLLPFKFKATLKPRALRAVLSQNASQTAVED
SKKAPFQHCFTKFEDGYLYCEGLKVHDIMESVERRPFYLYSKPQITRNVEAYRDALDGLN
SVIGYAIKANNNLKILEHLRHLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKILEDLV
LAAQAGVFVNIDSEFDLENIVEAAKRAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGI
RNEKLQWFLDAVKEHPNELKLVGAHCHLGSTITKVDIFRDAATIMINYIDEIRAQGFEVD
YLNIGGGLGIDYYHSGAVLPSPRDLIDTVRDLVLSRGLNLIIEPGRSLIANTCCLVNRVT
GVKTNGSKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPSNAEIATFDVVGPVCESADFL
GKGRELPTPAKGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDGSVSKIRHGETFEDH
IRFFEGL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctcacaccttctttctcactcccaatcccttaccaaaacctataaccactcc
tttaaccagaaccctttaactcaaaagctacttctacccttcaaattcaaagccaccctc
aaaccgcgtgctcttagagcggttctctcccagaacgcttctcaaaccgcggtagaggac
tcaaaaaaggctccttttcaacactgtttcaccaaattcgaagatgggtatctgtactgt
gagggcctcaaggtacatgacatcatggaatctgttgagagaaggcctttctatctttac
agcaagccccagataactaggaatgttgaagcctacagggatgcgttggatgggttgaac
tctgtaattggttatgccattaaggccaacaataacttgaagattctggaacatttgagg
cacttgggctgtggagctgtgcttgttagtgggaatgagcttagattggctcttcgtgct
ggattcgatcccacaaggtgtatctttaatgggaatggtaaaatcttggaggacttggtc
ttggctgcccaggcaggtgtgtttgtcaacattgatagtgagtttgacttggaaaacatt
gtagaggctgcaaaaagggctggaaagaaggtcaatgttttacttcggattaatcctgat
gtagatccacaggtccatccttatgttgccactgggaataagaactctaaatttggcatt
agaaatgagaagctgcaatggttcttagatgcagtgaaggagcatcctaatgagctcaaa
cttgttggggcccactgccatcttggttcaacaattaccaaggtagacattttcagggat
gcagccaccattatgatcaactacattgatgaaattcgagctcagggttttgaagttgat
tatttaaatattggaggaggacttgggatagattattatcattctggtgccgtccttcct
tcacctagagatctcattgacactgtacgagatcttgttctttcccgtggtcttaatctc
atcatcgaacctgggagatcactcattgctaacacatgttgcttagttaaccgggtaaca
ggtgttaaaactaatggatctaaaaacttcattgtaattgatggaagtatggcagagctt
atccgccctagtctctatgatgcttaccagcatatagagttggtttcccctaccccatca
aatgctgagatagcaacctttgatgtggttggccctgtctgcgagtctgcagatttctta
ggaaaaggaagagaacttcctactccagcgaagggtactggtttggtcgttcatgatgct
ggcgcttattgcatgagcatggcatcaacatacaatctaaagatgcggcctcccgagtat
tgggttgaagatgatggatcagtgagcaaaataaggcatggagagactttcgaagaccac
attcggttctttgagggcctttga
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