Phaseolus vulgaris (common bean): 137814509
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Entry
137814509 CDS
T03093
Name
(RefSeq) polyadenylate-binding protein 7-like
KO
K13126
polyadenylate-binding protein
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03015
mRNA surveillance pathway
pvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137814509
09123 Folding, sorting and degradation
03018 RNA degradation
137814509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137814509
03041 Spliceosome [BR:
pvu03041
]
137814509
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137814509
mRNA cycle factors
Stress granule specific factors
137814509
Spliceosome [BR:
pvu03041
]
Complex C
Other components
Complex C specific factors
137814509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_10
RBD_DEAH11
RRM_RdRP1_2
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
137814509
NCBI-ProteinID:
XP_068473389
LinkDB
All DBs
Position
1:44172121..44177619
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AA seq
631 aa
AA seq
DB search
MAVPPSVAASPASLYVGDLHPDVSDIHLVDAFSEFKSLTSVRVCKDSSTGKSLCYGYVNF
VSHQDAILAIETKNHTLLNGKMMRVMWSRRDPDARKSTIGNLFVKYIPESIDNAGLQDIF
KKYGNILSSKVVTSDDGKSKGYGFVQFESEESSHVAIEKLNGSTVGDKQLYVGKFVKKSD
RILPGADARYTNLYVKNLDLDITEAKLKEKFSSFGKIVSLAIAKDHYGMTKGFGFVNYDN
PDDAKKAMEETNGSQLGSKILYVARAQKKAERVQILHHQFEEKRKEQILKYKGSNVYVKN
IDDNVSDEELSDHFSACGTITSAKVMQDEKGISKGFGFVCFSTPEEANKAVNTFHGFMFH
GKPLYVALAQRKEDRKAQLQHQYTQQIAAGLAGPSTTIITGGYPPYYYPATGVISHVPPR
AGLMYQPLALRPGWGPNGFASPARSFQQSSVPAVSNNNRQNRQNRGRLNGHSASLGNTNS
GTYLQQAQQTSQSMISPRESSFHQRTGQPKYISSGRKRDMEKGSGSNSGRGCQGPEMLHS
LLAGAAPEQQKEILGEHLYMLVQKLKPSLAAKITGMLLEMDNGELLDLLESPESLSAKVE
EAVQVLKNSETKVSGQDVLHSNYLSAEVAVN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcctccgtcggttgccgcctctccggcgtcgctctacgtcggtgacctccat
cccgacgtttccgacattcacctcgtcgacgcattctccgagttcaagagcctcacctcc
gttcgcgtctgcaaagactcctccaccggcaaatccctctgttatggctacgtcaacttt
gtttctcatcaggacgcgattcttgcaatcgagactaagaatcatacgttgctgaatgga
aaaatgatgagggtgatgtggtcgcgtcgcgatcctgatgcgaggaagagcactattggg
aacttgtttgtcaagtacattcctgaatcgatagataatgctggactgcaagatatattc
aagaaatacgggaatattttgtctagcaaagttgtcacgtctgacgatggaaagagcaaa
ggatacgggtttgttcaatttgaatcggaagaatcttcacatgttgctatagagaagctg
aatggctctactgttggtgataaacagttatatgttgggaagtttgtaaaaaaaagtgat
cgcattttgcctggcgcggatgctagatatacaaacttgtacgtgaagaatttggacttg
gatattacagaagcaaaactgaaggagaagttttcctcttttgggaaaattgttagcttg
gctattgcaaaggaccactatgggatgaccaagggttttggctttgtgaactatgataac
ccagatgatgctaaaaaggcaatggaagaaacgaatggatcacaattaggttctaagatt
ctgtatgtagccagagcgcaaaagaaagctgagcgcgtgcagatcttgcaccaccaattt
gaggagaaacggaaggaacaaatattgaaatacaagggatcaaacgtttatgtgaaaaac
attgatgacaatgtaagtgacgaagaactaagcgatcattttagtgcatgtggcactata
acttctgcaaaagttatgcaagatgagaaagggataagtaaaggatttggctttgtctgc
ttctccactcctgaggaggccaataaagctgtgaacacttttcatggattcatgtttcat
ggtaaaccactgtatgttgcccttgctcagcggaaagaggataggaaagcacaattgcag
catcaatacacacagcaaatagcagcaggactggccggaccttcgactaccattatcact
ggtggatatcctccttattattatccagctactggtgttatttcacatgtgcctcctcga
gctgggctgatgtatcaacctcttgcattgaggccgggatggggacctaatggctttgca
tcccctgctagatcatttcaacaatcatctgttcccgcagtttctaacaataataggcag
aataggcaaaacaggggcaggttgaatgggcattcagcatcactgggtaatactaactct
ggtacttatttgcaacaagcccagcagacttctcagtccatgatctctccaagagagtca
agttttcatcagagaactggacagcctaagtacatatccagtggacgcaagcgtgacatg
gaaaaaggatctggttcaaattctggtagagggtgccaggggccagaaatgctgcatagc
ttgcttgctggtgctgctcccgagcagcaaaaagagatattgggagagcatctttatatg
cttgttcagaaactaaagcctagcctagcggcaaaaataacagggatgcttttggagatg
gacaatggagaattgttggatctcctggaatcgccggagtctctttctgcaaaggtggaa
gaagctgtgcaagtgcttaagaattctgagaccaaagtttctggccaggacgtacttcat
tcaaattacctttcagctgaagttgcagtgaactga
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