Phaseolus vulgaris (common bean): 137814734
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Entry
137814734 CDS
T03093
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137814734
09123 Folding, sorting and degradation
03018 RNA degradation
137814734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137814734
03041 Spliceosome [BR:
pvu03041
]
137814734
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137814734
mRNA degradation factors
5'-3' decay
Lsm complex
137814734
Spliceosome [BR:
pvu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
137814734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
137814734
NCBI-ProteinID:
XP_068473716
LinkDB
All DBs
Position
1:46372512..46375435
Genome browser
AA seq
148 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGRGREEGAGGRQPKGIGRGLDD
GGAKGAGGGRGKGGPSGKPGGNRGRGRG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctctcccttctcaaaactgctcaaggccaccccatgttggtggaactgaaa
aatggagagacttataacggccatttggttaattgcgatacatggatgaacatccatctc
cgagaagtcatttgtacatctaaagatggagatagattttggagaatgcctgaatgctac
atacgaggcaatacaatcaagtaccttcgagttcctgatgaggttattgacaaagttcaa
gaagaaaccaagacccgagcagatcgtaaaccacctggtgtggggcgtgggaggggaaga
ggcagagaggaaggtgctggtggacgtcaaccaaaaggaattgggcgtggccttgatgat
ggtggtgccaagggagcgggaggaggtcgaggcaagggtggccctagtggaaagcctggt
ggaaacagagggcgaggtagaggctga
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