Phaseolus vulgaris (common bean): 137814868
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Entry
137814868 CDS
T03093
Name
(RefSeq) phytochrome A-2-like
KO
K12120
phytochrome A
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
137814868
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
PAS_9
HisKA
PAS_10
Motif
Other DBs
NCBI-GeneID:
137814868
NCBI-ProteinID:
XP_068473896
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All DBs
Position
1:47641800..47647886
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AA seq
1130 aa
AA seq
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MSSSRPSQTSSNNSGRSRSSRRSARVLAQTTLDAKLHATFEESGSSFNYSNSVRLSSGTG
TVSGDHQTRSDGVTTAYLHQLQKSKLIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHA
VPSVGEHPGLGIGTDIRTIFTAPSSTSIQKALGFGEVSLLNPILVHCKSSGKPFYAIIHR
VTGSVIIDFEPVKPHEVPMTAAGALQSYKFAAKAITKLQSLPSGSMDTLCDTMVREVFEL
TGYDRVMAYKFHEDDHGEVIAEVKRPGLEPYLGLHYPATDFPQATRFLFLKNKVRMIVDC
RAKHVKVLQDKNIPFELTLCGSTLRAAHSCHLQYMQNMNSSASLVMAVVVNDNDEDGDSS
DAVQPQKRKRLWGLVVCHHSTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQIVEKNIL
RTQTLLCDMLMRDAPLGIVSQSPNIMDLVNCDGAALLYKNKIWRLGVTPSESQIREIALW
LSECHRDSTGLSTDSLSDAGFPGAATLGDITCGMAAVRIASKDIVFWFRSHTAAEIRWGG
AKHEPSERDDGRRMHPRSSFKAFLEVMKTRSLPWKDYEMDVIHSLQLILRNAFKDTERME
ISTYAINTRLGDLKIEGMQDLEAVTSEMVRLIETATVPILAVDVNGMVNGWNKKIAELTC
LPVEQAIGKHLLTLVEDFSVDRVKKMLDMALQGEEEKNVQFEIKTHDLKIDSGPISLVVN
ACASRDLQDNVVGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGW
CCEWNSAMTKLTGWKREEVMDKMLLGEVFGTQIAYCRLRNQEAVVNFSIVVNKAMAGLET
EKVPFSFFTRDGKHVECLLSVSKKLDAESVVTGVFCFLQLASPELQQALHIQRLSEQTAS
KRLKALTYLKRQIQSPLYGIVFSRKLLEGAELGAEQKQFLQTGGRCERQLSKVLDSDLDS
IVDGYLDLEMVEFTLHEVLVASLSQAMTKGNAKGIRLVSDVEELITRETLYGDGLRLQQV
LADFLLISINFTPNGGQIVVAASLSKQQLGKLVHLANLELSITHEGFGIPETLLNQMFGR
DGDESEEGISMLISRKLLNLMNGEVRYIREAGKSSFILSVELAAAHKSNS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcaaggcctagccaaacatccagcaataattctggcagatcaaggtcatcg
agacgcagtgctagggttcttgctcagacaactttagatgcgaaactgcatgcaactttt
gaggaatcaggtagttcttttaactactccaattcagtgagattgtcttccggcacaggc
actgtcagtggtgatcatcaaacaaggtctgatggagtaacaactgcttacctccatcag
ttacagaaaagcaagcttatccaaccatttgggtgcttgctagccttagatgagaaaaca
tgtaaggtcattgcttatagtgagaatgcacctgaaatgctcaccatggttagccatgct
gttcccagtgttggtgaacaccctggtcttggcattggcaccgacatacgaactattttc
actgccccgagttctacttctattcagaaggcactaggatttggggaggtttcacttctt
aaccccattctagttcattgcaagtcctctgggaagcccttttatgcaattatccatcgt
gttaccggtagtgtgatcattgattttgagccggtcaagcctcatgaagttcccatgact
gcagcaggtgccctgcaatcctataagtttgcagctaaagcaataactaaattgcaatcc
ttgcctagtgggagcatggacactctgtgtgacacaatggttcgagaggtttttgaactc
acaggttatgatagagtgatggcttataaatttcatgaggatgatcatggggaagtgatt
gctgaagtgaaaaggccaggcctagagccatatctggggttgcactacccagcaactgat
tttcctcaggccacacgttttttgtttctgaagaacaaggtgcgtatgatagttgattgt
cgtgcaaagcatgtgaaggtgcttcaggacaaaaatattccatttgaattaactttgtgt
ggatcaaccttgagggctgctcatagttgccacttgcagtacatgcaaaacatgaattct
agtgcttccttggttatggcggttgtagtcaatgacaatgatgaagatggggatagttct
gatgctgttcagccacagaagagaaagagactatggggtttagtagtttgccatcactct
actcccaggtttgttcctttccctctcaggtatgcttgcgaattcctggctcaggtattt
gccatccatgtgaacaaagaacttgagttagagtatcagattgttgagaagaatatcctg
aggactcaaacacttttgtgtgatatgctgatgcgagatgcacccctgggtattgtctca
cagagtcctaatataatggatcttgtgaactgcgatggtgcagcactgttgtataaaaac
aagatatggagattaggggtaacaccaagtgaatcccagataagagagatagctttgtgg
ctgtctgaatgtcacagggattccacaggtttgagtacagatagcttgtctgatgcaggc
ttcccaggggctgctactcttggtgatataacttgtggaatggcagctgtcagaatagct
tccaaagatatagttttctggtttcgatctcacacggccgcagaaattcgatggggtggt
gcaaagcatgagcctagtgaaagggatgatggtaggaggatgcatccaagatcttcattc
aaggctttccttgaagttatgaagacaaggagtttgccctggaaggactatgaaatggat
gtcattcattcattgcaactaatactgagaaatgcattcaaagacactgagagaatggag
ataagcacatatgctatcaatacaagattaggtgatttgaaaattgaagggatgcaggat
ctggaagcagtgactagtgagatggtaaggttaattgagacagcaacagtgccaattttg
gctgttgatgttaatgggatggtcaatggatggaataaaaaaattgctgagttgacatgt
cttccagttgagcaagctattgggaagcatttactcactcttgttgaagatttttcagta
gatagagtcaagaagatgttggacatggcactgcagggtgaggaagagaaaaatgtgcaa
tttgagatcaaaacacacgatttgaagattgattctggtcctatcagcttggtggttaat
gcttgtgcaagcagggatcttcaagataatgttgtgggggtttgttttgtggcccaagat
ataactgctcagaagacagtgatggacaaattcaccagaattgaaggcgactacaaggca
attgtgcagaaccgaaacccattgatccctccaatatttggcacagatgaatttgggtgg
tgttgtgaatggaattcagctatgacaaaattaactggatggaagcgagaggaggtgatg
gataaaatgcttttaggggaggtttttgggacacaaatagcttattgtcgtctaaggaat
caagaagctgttgttaacttcagcattgtagttaacaaagccatggctggtttggaaacg
gagaaggttccttttagtttctttactcgtgatgggaaacacgtagaatgtctgctttct
gtgagtaagaagttggatgcagagagtgtagttactggagtcttctgcttcttgcaacta
gctagtccagagctgcaacaagcattacacattcagcgcctatctgaacaaactgcttcc
aaaagactgaaagctttaacttatttgaaaaggcaaatccaaagtcctttatatgggatt
gttttctcccggaaattgttagaaggtgctgagttgggagctgaacaaaaacaatttctg
caaacgggtggtcggtgtgaacgccagcttagcaaagtccttgactcagatcttgacagc
atcgttgatggctacctggatttggagatggttgaatttactctgcatgaagtgttagtt
gcctccttaagtcaagccatgacaaaaggtaatgcaaaaggtatccgattagtgagtgat
gttgaagagctgatcacaagagaaaccttgtatggtgatggtctcaggctccagcaggtc
ttagccgactttttattgatttccatcaatttcacaccaaatggaggtcagattgttgta
gcagcctcattatcaaaacagcagttagggaaactagtccatcttgctaatttggagctc
agcataacacatgagggttttgggattccagaaacattgctgaaccaaatgtttggacgt
gatggtgatgaatctgaggagggtatcagcatgctgattagcagaaagctgctaaatctg
atgaatggagaagtgcgttatataagggaagcaggcaaatcatctttcatcttatcagtt
gaacttgccgcagctcataaatccaacagttaa
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