KEGG   Phaseolus vulgaris (common bean): 137814959
Entry
137814959         CDS       T03093                                 
Name
(RefSeq) THO complex subunit 4D
  KO
K12881  THO complex subunit 4
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03013  Nucleocytoplasmic transport
pvu03015  mRNA surveillance pathway
pvu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137814959
  09122 Translation
   03013 Nucleocytoplasmic transport
    137814959
   03015 mRNA surveillance pathway
    137814959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137814959
   03041 Spliceosome [BR:pvu03041]
    137814959
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     137814959
    TREX complex
     137814959
Spliceosome [BR:pvu03041]
 Complex C
  Other components
   EJC/TREX
    137814959
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137814959
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 137814959
NCBI-ProteinID: XP_068474038
LinkDB
Position
1:complement(48440497..48447035)
AA seq 302 aa
MASSLDMSLDDRIKNRSNRGGRGRGGRGRAQPGRGPSGALNGGRMAGAVNSRRMTGAGNG
GRTSGAVRRGPLMVNTRPSSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYV
SNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVL
LDGKPMKIEIVGSNGELPISARVNVTGVNGRRKRTVVMTPRGGQAGVPAIRNRGAGWGRR
GGTRSGNGQGRGGGGRGRGNARGGNTGRGGGRGRGRKDTVEKSAEELDKELDTYHAEAMN
IS
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcttcttccttggatatgtcacttgatgatagaataaagaacaggagtaacagagga
ggtagaggtagaggaggacgtggcagagcccagcctggccgtggtccaagcggggctctt
aatggtggaagaatggctggtgctgttaatagcagaagaatgactggtgctggtaatggt
ggaagaacatctggtgctgttcgtagaggtcctcttatggttaacactcggccatcatca
tatgctattgccaagtctattcgcagaacgaggccctttccatggcagcatgatttgttt
gaagatagcttaagagctgcagggattcaaggagtagaagttggcaccaaattgtatgtt
tccaacttggaccatggagtgaccaatgaagacataagggaacttttctctgagcttgga
gagttgaagcgttatgctgttcattacgacaaaaatggacatccaagtggttcggctgaa
gttgtttatactagaagaagtgatgcatttgctgctcttaaacgatataataatgtgctt
ttggatggcaagcccatgaagattgagattgttggttccaatggggaattgcctataagt
gctcgggtgaatgtcactggggtgaatggacgtaggaagaggactgttgtaatgacgcct
agaggtggacaagctggagttcctgctattcgtaatcgtggtgctggttggggaaggcgt
ggtggcacaaggagtggcaatggtcagggtcgtggtggcggaggtcgtggtcgcggcaat
gctcgtggtggtaacactggtagaggtggaggtcgaggccgaggtagaaaggacactgtt
gagaagtccgcagaggaacttgacaaagaactggatacctatcatgctgaggccatgaac
atctcttga

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