Entry |
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Name |
(RefSeq) nuclear pore complex protein NUP88
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KO |
K14318 | nuclear pore complex protein Nup88 |
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Organism |
pvu Phaseolus vulgaris (common bean)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pvu00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137815044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pvu03019]
137815044
Messenger RNA biogenesis [BR:pvu03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137815044
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:complement(49475990..49481622)
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AA seq |
801 aa
MRITLEPSSEPSPSHSQTPKDEVEWVPLPKHPLFTAHGGANIAAYRNLLAWDGASRLYFW
DANNRFLHRLSLRLGDPDPSSVLASSPSKVLQADAVLDFDVHKISINRNGTAILLFGSET
LSVMYLYGRASKKDVNLICRTITVGSHAHSTGGNDIRVLQVLWHPYSDTHLGILSSDSVF
RLFNLAVDPLQPEQEYYLQPVEPGRSRNASSVCPVDFSFGGDHLWDRFSVFILFSNGAIY
VLCPIVPFGSLFKCESLVEIYNDAHTFGIISANSVAASNSKLAISWLEATFPELQNQDTE
GDSLSLLRAHAYSLFDASLVLQGPLRRVGQDGNEDSFGCSAECEGRAVSFLYNLVSKDSI
LVTAWSGGQLQIDALADEIQPVWCVGSPPRLRVDSHDQILGLAMICESITCSSLGKVDHN
AWLGNPPPLLRLAIVDLALPRRAESGYNISLFIDMLMPERIYSLHDGGIDSIVLHFLPFT
SQSNGKDDTMKTPSVHPVLNTCQSRYTSEPSICGFASLSDSFGYSWIVAITLSLECVVLE
MKSWNLLLPVSIDLEKKPISSEGESKERDIPTIISKELLSGPKEVLVPHASPSLRSVAAD
SIEGRSTLHQYFKLFHETYVEYGHKVYLELKHHAPQLKKIINDQHSRLGDAQQKLLNGEE
KEAILKKRLDRAIQMHNSLEERLQQLRNMPCAHKKPLSRAERQFKSELDRFKEVELDALH
SSVDALSARLRRHLQASKANQQQKTAGKKTHAGDNQISMLKSSLEKLSLVNTENSKKVKL
VESTLRNKERSSGRESSLPLV |
NT seq |
2406 nt +upstreamnt +downstreamnt
atgagaatcacgttggagccgagctcggagccgagcccaagccactcccaaactcccaaa
gacgaagtcgagtgggtcccgcttcccaagcatcctctcttcaccgcacacggcggcgcc
aacattgccgcttaccggaatctcctggcctgggacggagcctcgcgcctctacttctgg
gacgccaacaaccgcttcctccaccgcctctctctccgacttggcgaccccgatccctct
tccgtcctcgcctcttcgccctcgaaggtgttgcaagcggacgcggtgctcgatttcgac
gtccacaaaatctccatcaacaggaacggaacagcaatactccttttcggttccgaaacg
ctctctgtcatgtatctctacggacgcgcatctaagaaggatgtgaacttgatttgcagg
actattactgttggttctcatgcacattccactggtggcaatgatattcgggtgttacaa
gtattatggcacccttacagtgatactcatttgggaattctttcttctgactcagttttc
agacttttcaacctggctgtggatcctttgcaaccagagcaagaatattatttacagcct
gttgagccgggtagatctagaaatgcctcatcagtgtgcccagttgatttttcttttggg
ggtgaccacttatgggacaggtttagtgtttttattttgttcagtaatggggctatctat
gtactctgccccattgttccatttggaagtctcttcaaatgtgagtccttggtagaaata
tataatgatgctcacacatttggaataatatcagccaactctgttgctgcaagtaattca
aagttggcaatctcctggttagaagcaacatttcctgagttacagaaccaagacactgaa
ggagacagtctgtccttgctaagagctcatgcttattctttatttgatgcatctcttgtc
ttgcagggacctctgcgaagagtaggtcaggatggaaatgaagattcatttggttgtagt
gcagaatgtgaaggtcgtgcagttagttttctgtacaatttagtcagtaaagactctatt
ttggtgactgcctggagtggtgggcaattgcagatagatgctctagccgatgagatccaa
cctgtctggtgtgttggtagtccgcctcgtcttcgtgttgattcccatgaccaaattctt
ggccttgctatgatttgtgagtcaattacctgcagtagtctggggaaggttgatcataat
gcctggttgggtaatccaccccctttactgagactggctattgttgatttggctctgcca
cgaagagcagaaagtggttataatatttctttgttcattgatatgcttatgccagaaaga
atatattcccttcatgatggagggattgactcaatagttttacattttcttccatttact
agtcagtcaaatggcaaggatgatacaatgaaaacaccgtctgtgcaccctgtgttaaat
acttgccagagtcgatacacctcagagccctcaatttgtggctttgcgtctttatcagat
tcatttggatattcatggattgtagctattacactttctcttgagtgtgttgtgcttgag
atgaaaagttggaacctcttgcttccagtaagcattgatttggagaagaaacccatttca
tcagagggggaatcaaaggagagagatataccaacaataattagcaaagaactacttagt
ggacccaaggaggtacttgttccccatgcctctccaagtttgcgttctgttgcagctgat
tcaattgaaggtcgatcaacattacatcagtatttcaagctgtttcatgaaacttatgtg
gagtatggacataaggtgtacttggagctcaagcatcacgcacctcagttgaagaaaatc
attaatgaccaacattctcgtttaggcgatgcacaacagaaacttttgaacggtgaggag
aaagaggctatattaaagaaaaggttagatcgtgctattcaaatgcacaattctttggaa
gagcgcttgcaacaattaaggaacatgccttgtgctcacaaaaaaccactgtccagagca
gagcggcagtttaaatcagagcttgaccgctttaaggaagttgagttggatgctttgcat
tcttctgttgatgcactaagtgcaaggctgagaaggcacttgcaagcttcgaaagctaat
cagcaacagaaaacagctgggaagaaaactcatgctggagacaatcagatatccatgctc
aaatcatctcttgaaaaactctcacttgtaaatactgagaattcaaagaaagttaaactc
gtggagtctacattgagaaacaaagaaagaagcagcggcagagaatcaagtctgcctttg
gtctaa |