KEGG   Phaseolus vulgaris (common bean): 137815044
Entry
137815044         CDS       T03093                                 
Name
(RefSeq) nuclear pore complex protein NUP88
  KO
K14318  nuclear pore complex protein Nup88
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    137815044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137815044
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     137815044
SSDB
Motif
Pfam: Nup88 V-SNARE
Other DBs
NCBI-GeneID: 137815044
NCBI-ProteinID: XP_068474166
LinkDB
Position
1:complement(49475990..49481622)
AA seq 801 aa
MRITLEPSSEPSPSHSQTPKDEVEWVPLPKHPLFTAHGGANIAAYRNLLAWDGASRLYFW
DANNRFLHRLSLRLGDPDPSSVLASSPSKVLQADAVLDFDVHKISINRNGTAILLFGSET
LSVMYLYGRASKKDVNLICRTITVGSHAHSTGGNDIRVLQVLWHPYSDTHLGILSSDSVF
RLFNLAVDPLQPEQEYYLQPVEPGRSRNASSVCPVDFSFGGDHLWDRFSVFILFSNGAIY
VLCPIVPFGSLFKCESLVEIYNDAHTFGIISANSVAASNSKLAISWLEATFPELQNQDTE
GDSLSLLRAHAYSLFDASLVLQGPLRRVGQDGNEDSFGCSAECEGRAVSFLYNLVSKDSI
LVTAWSGGQLQIDALADEIQPVWCVGSPPRLRVDSHDQILGLAMICESITCSSLGKVDHN
AWLGNPPPLLRLAIVDLALPRRAESGYNISLFIDMLMPERIYSLHDGGIDSIVLHFLPFT
SQSNGKDDTMKTPSVHPVLNTCQSRYTSEPSICGFASLSDSFGYSWIVAITLSLECVVLE
MKSWNLLLPVSIDLEKKPISSEGESKERDIPTIISKELLSGPKEVLVPHASPSLRSVAAD
SIEGRSTLHQYFKLFHETYVEYGHKVYLELKHHAPQLKKIINDQHSRLGDAQQKLLNGEE
KEAILKKRLDRAIQMHNSLEERLQQLRNMPCAHKKPLSRAERQFKSELDRFKEVELDALH
SSVDALSARLRRHLQASKANQQQKTAGKKTHAGDNQISMLKSSLEKLSLVNTENSKKVKL
VESTLRNKERSSGRESSLPLV
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgagaatcacgttggagccgagctcggagccgagcccaagccactcccaaactcccaaa
gacgaagtcgagtgggtcccgcttcccaagcatcctctcttcaccgcacacggcggcgcc
aacattgccgcttaccggaatctcctggcctgggacggagcctcgcgcctctacttctgg
gacgccaacaaccgcttcctccaccgcctctctctccgacttggcgaccccgatccctct
tccgtcctcgcctcttcgccctcgaaggtgttgcaagcggacgcggtgctcgatttcgac
gtccacaaaatctccatcaacaggaacggaacagcaatactccttttcggttccgaaacg
ctctctgtcatgtatctctacggacgcgcatctaagaaggatgtgaacttgatttgcagg
actattactgttggttctcatgcacattccactggtggcaatgatattcgggtgttacaa
gtattatggcacccttacagtgatactcatttgggaattctttcttctgactcagttttc
agacttttcaacctggctgtggatcctttgcaaccagagcaagaatattatttacagcct
gttgagccgggtagatctagaaatgcctcatcagtgtgcccagttgatttttcttttggg
ggtgaccacttatgggacaggtttagtgtttttattttgttcagtaatggggctatctat
gtactctgccccattgttccatttggaagtctcttcaaatgtgagtccttggtagaaata
tataatgatgctcacacatttggaataatatcagccaactctgttgctgcaagtaattca
aagttggcaatctcctggttagaagcaacatttcctgagttacagaaccaagacactgaa
ggagacagtctgtccttgctaagagctcatgcttattctttatttgatgcatctcttgtc
ttgcagggacctctgcgaagagtaggtcaggatggaaatgaagattcatttggttgtagt
gcagaatgtgaaggtcgtgcagttagttttctgtacaatttagtcagtaaagactctatt
ttggtgactgcctggagtggtgggcaattgcagatagatgctctagccgatgagatccaa
cctgtctggtgtgttggtagtccgcctcgtcttcgtgttgattcccatgaccaaattctt
ggccttgctatgatttgtgagtcaattacctgcagtagtctggggaaggttgatcataat
gcctggttgggtaatccaccccctttactgagactggctattgttgatttggctctgcca
cgaagagcagaaagtggttataatatttctttgttcattgatatgcttatgccagaaaga
atatattcccttcatgatggagggattgactcaatagttttacattttcttccatttact
agtcagtcaaatggcaaggatgatacaatgaaaacaccgtctgtgcaccctgtgttaaat
acttgccagagtcgatacacctcagagccctcaatttgtggctttgcgtctttatcagat
tcatttggatattcatggattgtagctattacactttctcttgagtgtgttgtgcttgag
atgaaaagttggaacctcttgcttccagtaagcattgatttggagaagaaacccatttca
tcagagggggaatcaaaggagagagatataccaacaataattagcaaagaactacttagt
ggacccaaggaggtacttgttccccatgcctctccaagtttgcgttctgttgcagctgat
tcaattgaaggtcgatcaacattacatcagtatttcaagctgtttcatgaaacttatgtg
gagtatggacataaggtgtacttggagctcaagcatcacgcacctcagttgaagaaaatc
attaatgaccaacattctcgtttaggcgatgcacaacagaaacttttgaacggtgaggag
aaagaggctatattaaagaaaaggttagatcgtgctattcaaatgcacaattctttggaa
gagcgcttgcaacaattaaggaacatgccttgtgctcacaaaaaaccactgtccagagca
gagcggcagtttaaatcagagcttgaccgctttaaggaagttgagttggatgctttgcat
tcttctgttgatgcactaagtgcaaggctgagaaggcacttgcaagcttcgaaagctaat
cagcaacagaaaacagctgggaagaaaactcatgctggagacaatcagatatccatgctc
aaatcatctcttgaaaaactctcacttgtaaatactgagaattcaaagaaagttaaactc
gtggagtctacattgagaaacaaagaaagaagcagcggcagagaatcaagtctgcctttg
gtctaa

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