Phaseolus vulgaris (common bean): 137816117
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Entry
137816117 CDS
T03093
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137816117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137816117
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
137816117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SAWADEE
Motif
Other DBs
NCBI-GeneID:
137816117
NCBI-ProteinID:
XP_068475309
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All DBs
Position
1:complement(49827106..49832055)
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AA seq
1177 aa
AA seq
DB search
MHIRRNSRQSKHPFHAYPFETLLSGSWQAVEFIKIEAGTTSLQCIDNHHRTTEKGLLSDL
RIRSRKATLSDCSNFLRRGIDICVLSASQSGDTNSDRFCADNVWLDAKINSIQRKHHNSG
CSCLYYVNLYVNQGSLGREIRTLSKEVKVIGINEIAILQKLERNTCEDQHYRWESSEDCS
QVLHTKLVLGKFLSDLSWLVVTSALKKVSFYARSVENKIVYQILGSDATGSSLNMHSSMR
VANFEVNDGTMKPIVTQVDVSDTNTHDSHYDEVSPSYDVEGLRRSKRMNIQPERYLGCGN
VSEIKVGNVRTWPYKIMKRKDDDDVCSCRQILVYSRRRKKELKSGEANQNENQTRLASVP
LLEERDSLALEHHDLNDKGTSSNANYSNHKHKRKRFLDSDPGWEDLNSNLKSNRNYRSLN
ATDYKEIIDSYLKDINRTPTKEEPTVMDLWKEITKLEKKKEAEIPQREEEEQISEMDMLW
REMEMALTSSHIEEGSIGANFAENSEESNHTCQHDYRLYEEIGIYCFKCGFVKTEIKYVT
PPFVSQYYQVRQQEEKQCSGKEDDKDDDFHQLSSRDELISMEHDNVWKLIPELREKMHVH
QKKAFEFLWQNISGSMDPTLMDAESKRRGGCVISHSPGSGKTFLIIAFLISYLKLFPGMK
PLVLAPTTTLHTWHKEFIKWDISVPVYLIHGRSEPQKDDMQNSTVLPHFRNPNKNVKHIL
NCLDKIKKWQTHPGVLVMSYTSFLALMREGSEFTPRKYMAKALRERSGILILDEGHNPRS
TKSRLRKVLMKVQTDIRILLSGTLFQNNFSEYFNTLCLARPKFIYEVLKELDTNGRRKGK
TTEKSRHLLESQARKLFLDNITKKIDSSNRHERMQGLNMLREITNGFIDIYESASFNSVP
GLKMFTLLMNTTDLQSEVLMKLHKRMAECTGYPLELELLITLGSIHPWLVKTASYANKFM
ALDQLQQLEKCKLDLKAGSKVKFVMSLVLHVMEKEKVLIFCHNHAPVKLLVELFEMVFKW
EKGREILLLNGEQDLFERGKVIDKFEEPRGASKVLLASIKACGEGISLTSASRVIFLDSE
WNPSKTKQAIARAFRPGQQKMVYAYQLLARGTLEEDKYRRTTWKEWVSSMIFSEAFQENT
SHSQAKMIEDDILREMVEEDKSKSIHMILKNEKASTN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcatataagaagaaattcacggcaatcaaagcatccattccatgcttatccctttgag
acattgttgtctggttcatggcaagctgtagagttcataaaaattgaggcaggaactacg
agtctgcaatgcatagataatcaccataggaccacggagaagggccttttgtcagacctt
agaataagatcaaggaaagccactttatctgattgctccaactttttaagacgtgggatt
gacatttgtgttctctcagcctctcagagtggtgatactaattctgatagattttgtgct
gacaatgtgtggcttgatgctaaaataaattctatacagagaaaacaccataattcaggg
tgctcatgtctgtattatgtaaacctctatgttaatcaaggttcacttggtagagagata
agaactctcagtaaggaggttaaggtaattggaataaatgaaattgccatcctccaaaag
cttgaacgtaatacttgtgaagaccaacactatcgatgggaatcatctgaagattgctcc
caagtattgcatactaaattggtactaggaaaatttttatctgacctttcatggttagtt
gttacatctgctttaaagaaggtttcattctatgcaagatctgtggaaaacaagattgtg
tatcaaattttaggtagtgatgccaccggctcttcattaaacatgcattctagtatgcgt
gttgctaattttgaagtgaacgatggcacgatgaagcccattgttactcaagttgatgta
tctgacaccaatacacatgattcccattatgatgaagtgtcaccatcttatgatgttgag
ggcttaagacgatccaaacgtatgaacatacaacctgaacgttacttaggttgtggtaat
gtttctgaaataaaggttggcaatgttcgaacttggccatacaagatcatgaaaaggaaa
gatgatgatgatgtgtgttcttgccggcagattttagtgtacagtaggaggagaaaaaag
gaattaaagtctggtgaggccaaccaaaatgaaaatcaaactcgacttgctagtgttcct
cttcttgaagagagagattcattagcccttgagcatcatgacctcaatgacaaaggtact
agtagtaatgcaaattacagcaaccataagcataagaggaagagatttttagattctgat
cctggatgggaagacttaaattccaatttaaagtccaacagaaattatagaagcttaaat
gcaactgactacaaggaaataattgattcatacttaaaggatattaatagaactcctaca
aaagaagaaccaactgtaatggacctgtggaaggaaataacgaaattggagaaaaagaag
gaagcagaaatacctcaaagagaggaagaggaacaaatctctgagatggatatgctgtgg
agagaaatggaaatggcattgacatcatctcatattgaagaaggttcaattggtgccaat
tttgctgagaattcggaagaatctaatcacacttgtcaacatgactacagactgtatgaa
gaaattggaatatattgcttcaaatgtggctttgtgaaaaccgagataaaatatgtcacg
ccaccctttgtaagtcaatattatcaagtgaggcaacaagaggagaagcaatgcagtgga
aaagaggatgataaagatgatgatttccatcagttatcaagtcgtgatgaactaatttct
atggaacatgacaacgtttggaagttgatccctgaacttagagaaaagatgcatgtccac
caaaagaaagctttcgaatttctttggcaaaatattagtgggtctatggatccaacacta
atggatgcagaatccaaaagaagagggggttgtgtcatatctcattctcctggatctggt
aaaacttttctcatcattgcatttctcattagctatttaaagctattcccagggatgaag
cctcttgtccttgctccaacaaccactcttcacacttggcacaaagaattcatcaaatgg
gatatttctgtgccagtgtatctgattcatgggcgcagtgaacctcagaaagatgatatg
caaaattcaactgttcttcctcattttcgaaatccaaataaaaatgtcaagcatattttg
aactgcttggacaagataaaaaagtggcaaacacacccaggtgttctggtcatgagttat
acctcatttttagcattaatgagagagggttcagagtttacacccagaaagtatatggct
aaagcattgagggaaagatccgggatcctgatacttgatgaaggtcacaatcctagaagc
actaaatcaaggttgaggaaagtgttgatgaaagtacaaacagatataagaatactactt
tctggtacattgtttcagaacaacttcagtgaatactttaacacactttgtttggcaaga
ccaaagtttatttacgaagtgctgaaagagttagacacgaatggcagaagaaaaggcaaa
acaacagagaagtcacgtcatttgctagagtctcaagctagaaaattgttcttagacaac
attaccaagaagattgactcaagtaatcgacatgagaggatgcaaggtctaaacatgttg
agagaaatcacaaatggtttcatagatatttatgaaagtgcaagttttaacagtgttcct
ggcttgaaaatgtttacgttgctaatgaatacaactgacctgcagagtgaagttttgatg
aaactgcacaagagaatggctgagtgcacagggtaccctctggagttagagcttttgata
acccttggatcaatacatccatggctggttaaaacagcctcatatgcaaataagtttatg
gctttggaccaactgcagcagctagagaaatgcaagttagacttgaaggcagggtcaaaa
gtaaaatttgttatgagccttgttctccatgttatggagaaggagaaagtacttatattc
tgtcacaatcatgcacctgtgaagttattggtagagttatttgagatggtgttcaaatgg
gaaaagggtagagaaattttgttgcttaatggggaacaagacctctttgaacgtggaaaa
gtgatagataagtttgaagaacctagaggagcatcaaaggtgctccttgcttcaatcaaa
gcttgtggtgaaggtattagtttgacatcagcttcaagagtgatttttctggactcagag
tggaatccatcgaagacaaagcaagctattgcaagggcctttcgtcctggtcagcaaaag
atggtttatgcatatcagcttttggcaagaggcacattagaggaagataagtacagaaga
accacttggaaagagtgggtttctagcatgattttcagtgaggcatttcaggagaacact
tcacattcacaagcaaagatgattgaagatgacatactgagggaaatggttgaagaggac
aaatccaaatcaattcacatgatactcaagaatgaaaaggcttccacaaactga
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