Phaseolus vulgaris (common bean): 137816540
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Entry
137816540 CDS
T03093
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137816540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137816540
03036 Chromosome and associated proteins [BR:
pvu03036
]
137816540
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137816540
Coactivators
SAGA/TFTC/STAGA complex
137816540
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
137816540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
137816540
NCBI-ProteinID:
XP_068475820
LinkDB
All DBs
Position
1:complement(2302616..2311873)
Genome browser
AA seq
935 aa
AA seq
DB search
MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDLSASLPGSDAVLSQGSNNTSSQS
LSQWPTSNPDSQTDGQNQEPKTAQQEQHSSEMEPKQHGSLGEHLQHVASQDVNNPHLSQK
QSQDDCHQAQAPAVQVPLHNSQTIGIQNSVKDSVLNNEVVKSHNPSSESQYAKLQQMSNQ
QATVSEQPSSQVNRSKQVPFGLLLPILLPQLAKDRAMQLQTLFAKLKKDEIPKDSFVRLM
KGIVGDQMLRLALAKVQMQPQARSNQASAGQQLPVRMPTVSSGARQLNDPHALAQMHQRS
MNVAVDQSRLSSSAGQTMDSNARKSQEFDVKIESQGLQPNQLTSSSSNTVGQETERTSVH
IQGLNKQQQHHLHFAPTYGNSGGNYNPYSGATSSSSSSIKLQSHDSHMSQIPHQSIGSNH
LGGSTHGLSVTGMPKVEQQNSFNDPKRLPGGSVSSSINNTASQQTSTAWQSSTNKEQNLG
LMSSVSYVKKEPTDLSTEQQNRHNLSKLHGYSSVNSAQLEQSGASQGTLKDDFSRGLPAS
TNMPPTTSTGLLPHSSGSSSIMTHLDSSVPLSSQVPSNASGIVARTSFKKSAVTQKKPLE
ALGSSPPPSSKKQKTSGGYVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASR
KAVQEEEERLILQKAPLQKKLIDIMAKSGLKGMSNDVEKCLSLSVEERMRGLISNLIRIS
KQRVDFEKTRHRTVVTSDVRQQIMTINRKVREEWEKKQAEAEKLRKLNDVDGSTGVDGDK
DKDDRGKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGVDPSSG
SQPAKDVNRKSSSTSERSTKDNQEGEKRGSTPFLASSVARKLGKSHALAPHTSVARSISV
KDVIAVLEREPQMSKSPLIHRLYEKIHSEAPVEQG
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggacccgtctatcatgaagcttctagaagatgacgaggatgaaacaatgcattcaggg
gtggatgtggaggccttccaggctgctctaaatagagatataggaggagacttgtctgct
tctcttcctggttcagatgcagtgttgtctcaaggaagcaataatacatcaagtcaatct
ttatcacagtggcctacttctaaccctgacagccaaactgatggtcaaaatcaagagcct
aaaactgcacaacaagagcaacattcatctgagatggagccgaagcaacatgggtcgctt
ggcgagcatcttcagcatgttgcttctcaggatgtaaataatcctcatctatcacagaaa
caatctcaagatgactgtcaccaagcacaagcacctgctgtacaagttcccctccacaat
tctcaaactattggaattcagaattctgtaaaggattcagttcttaataatgaagtagta
aagagtcataatcccagcagtgaatctcagtatgcaaagttgcagcagatgagtaatcaa
caggctacagtctctgagcagccaagtagccaagtaaatcgtagtaaacaagtaccattt
ggcctgttgctacccatcttgcttcctcaacttgccaaagacagagccatgcaacttcaa
accttatttgctaaattgaagaaagatgaaataccaaaagacagttttgtgcggcttatg
aaaggtatcgtaggggaccagatgcttagattagcattagcaaaggtgcaaatgcaacca
caggcaaggtccaatcaagcatctgctgggcagcagcttcctgtaaggatgccaactgtt
agttcaggtgcaaggcaattgaatgatccccatgctttagcacagatgcatcaaagaagt
atgaatgttgccgttgaccaatctcgcctgagttcttcagctggccaaactatggatagt
aatgctagaaaatctcaggaattcgatgttaaaatagaatctcaaggattgcaaccaaac
cagttgacgtcttccagttccaacacagtaggtcaagaaacagaaagaacatcagttcac
atacaagggctcaataagcagcagcaacaccatctacattttgcaccaacatatggaaac
agtggtggtaactataacccttattctggggcaacaagtagttcctcttcgtctatcaaa
ctgcaatcacatgattcacacatgagtcaaattcctcatcaaagtattggttcaaatcac
ttaggtgggtcaacacatggtttgagtgtaactggtatgccaaaagttgaacagcagaat
tctttcaatgatcccaagagactgccaggtggatctgtgtcttcttctataaacaataca
gcatctcaacaaacttcaactgcttggcaatcatcaacaaacaaagaacaaaatctgggc
ttaatgtcatctgtttcttatgtcaagaaggaacctactgacttatctactgagcagcaa
aataggcacaatttgtcaaaattgcacgggtattcttctgttaattctgctcagcttgaa
cagagtggtgccagtcaaggaactctaaaagatgacttttcaagaggtcttccggcatcc
acaaacatgccacctacaacatctactggcttgctaccacacagttctggttcctcttct
ataatgacccacctagactctagtgtcccgctaagctctcaggttccatcaaatgcttct
ggaattgttgctaggacatcttttaaaaagtctgccgttacccaaaagaaaccacttgaa
gcacttggttcctcacctcctccttctagtaaaaaacaaaaaacatctgggggatatgtt
gaacaaagcattgaacaacttaatgatgtcactgctgttagtggagttgacctcagggaa
gaggaagagcagttattttcagggcccaaagaggatagtcgagtgtcagaagcatctcga
aaggctgtgcaagaagaagaggaaagactgatcttgcagaaagctccattgcaaaaaaaa
ttaattgacatcatggccaagtctggcttgaagggtatgagcaatgatgtggagaaatgt
ttgtcactgagtgtggaggaaaggatgcgtggactgataagtaatctgattagaatatca
aaacagagggttgattttgagaaaacgagacatcggactgttgtcacttcagatgttcgg
cagcaaatcatgacaataaataggaaagtaagggaagagtgggagaaaaaacaggcagaa
gcagagaagcttcggaaactaaatgatgttgacggcagtactggagttgatggtgacaag
gataaggacgaccgtggtaaatcaacaaaggtgaacaaggaagaggatgacaagatgagg
acaaatgctgccaatgttgctgctcgtgctgcttatgggggagatgacatgctgtcaaag
tggcaacttatggcggagcaagccaagcagaaacgtgaaggggtggacccgtcatctggt
tctcaaccagctaaagatgtgaaccgcaaatcttcatcaacatctgaaagaagtacaaag
gataaccaagaaggggagaaaagaggttcaaccccttttctagcaagttcagtggccaga
aaacttggaaagagtcatgccttggcccctcacactagtgtagctcgaagcatctctgtc
aaggatgtgattgcagtcctggagagggagccccagatgtctaaatccccactcatacat
cgcttgtacgagaaaattcattctgaagccccagttgaacaaggttaa
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