Phaseolus vulgaris (common bean): 137816565
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Entry
137816565 CDS
T03093
Name
(RefSeq) WD repeat-containing protein PCN-like
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137816565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvu03009
]
137816565
Ribosome biogenesis [BR:
pvu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
137816565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
WD40_Gbeta
PQQ_2
Beta-prop_IFT122_1st
EIF3I
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_2
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
137816565
NCBI-ProteinID:
XP_068475859
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Position
1:complement(2565338..2573788)
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AA seq
815 aa
AA seq
DB search
MVETYRVRSVDWRPSPVVALATTIDGARVAAARQDGSLEIWLVSPGAIGWHCQLTIHGNP
NGRVTSLIWCPGGVDGSRLFSSNVDGTVSRWDLFHLKQETVLKSEVSIWQMAMKFPIDDK
VNDENKAERVGKENGNGFHDFVERESSDSDDDSHSPGPLEHSYKELPRVAIGFNDGRLRI
YEITDTDEFILVKSLPPVSGRVLSVTWSEDANYIYSGSSDGLIRCWNATLGNEVYRITAG
LGGLGSGQELCIWSLLSLRNGTLVSADSSGSVQFWDSRHGTLLQAHSLHKGHVFALAAAP
SHNRVFSAGSDGQVILYKLSGSQAASADDINYSSMTKRWIYIHHVRSHTHDIRALSVAVP
ISFEADINPEKRIKRIRGGRKPTDFSYHKWAHLGVPMLISAGDDTKLFAYPVKEFTMFPP
HDICPAPQRTPTQLVLNSIFNQSKILLVQSSKHIDVHLLPHKNVSSPGGLTKTEIVARVK
SKASRKIICSSISNSGALIAYSDHKRPSLLELKRCEVGKITWDVDRRELPQRLPFAHSMV
FSHDSSKLIVAGCDRRIYVVDIGKGELVHTFTPRREPQDEELPPTEPPITRLFSSSDGQW
LAAVNCFGDIYVFNLEIQSQHWFISRLDGASVTAGGFPPQNDNVLIVTTSSNQVYALDVE
AKQLGEWSKRHTFALPRRYQEFPGEVIGLSFPPVEASSSPTAISSSVVVYSSRAMCLIDF
GLPVEQDEGDNTQDSRAGNFQYFSVTKGTKHSKRKFEVLPIEKPVRRNFQVLPLENPVLF
LAHTSKNSLFIVDKPWLQVVKSLEAPPVHRHIYGT
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaacctacagggtaaggtccgtcgattggagaccatcgccggtggtggcgcta
gccaccaccatcgacggcgcgcgagttgctgccgctcgccaggatggctccctcgaaatc
tggcttgtttctcccggcgccatcggttggcactgtcagctgactattcacggaaaccct
aacggaagagtgacgtcgcttatttggtgccctggaggagtcgacggaagccgtttgttt
tcgtccaacgtggatggcacggtttctaggtgggatcttttccatttgaagcaggagacg
gtgctgaaatctgaagtctcaatctggcaaatggcgatgaagtttcctatagatgataag
gtgaatgatgaaaataaggctgaacgggtggggaaagaaaatgggaacggtttccatgat
tttgttgaacgtgagagcagtgatagtgatgatgattctcattcgcctggtccacttgag
cattcttataaggagctcccacgtgtggcgattggttttaatgatggaagattgagaatc
tatgaaatcactgacactgatgaatttattcttgtaaaatctttgccccccgtttcagga
cgagttttaagtgtgacttggagcgaagatgctaactacatttattcgggaagcagtgat
ggtttgatacgttgctggaatgctacattgggcaatgaagtctacaggattacagctgga
cttggagggttgggcagtggacaggaactttgcatatggtcattactgtcgttaaggaat
ggtacacttgtcagtgcggacagcagtggtagtgttcagttttgggacagccgacatgga
actctcttgcaagcacattctttacataagggacatgtatttgctctggcagcagctcct
agtcataatagggtgttttctgctggttctgatggtcaggttattctttacaagctttcc
ggtagtcaggcagcatcagctgatgatatcaactattcttcaatgacaaagagatggatt
tatattcaccatgtaaggtctcatacacacgacatcagggccctttctgtcgctgtaccc
ataagttttgaagctgatattaacccagaaaagaggattaaaagaattcgaggaggaagg
aagcccacagattttagttaccataagtgggctcatttgggggttcctatgcttatctca
gcaggagatgacacaaaactttttgcatacccagttaaagaattcaccatgtttcctcct
catgacatctgtcctgcaccccagaggacacccactcaactagtgctcaactctattttc
aatcaatccaaaatccttttagtccaatcatcaaagcacatagatgttcatttgctaccg
cataaaaatgtttccagccctggtggacttaccaagaccgaaatagttgctcgagtcaag
agtaaggcatcacggaagataatttgcagctctatttctaattcaggggcactaattgcg
tactctgatcataaaaggcctagtcttttggaattgaaaaggtgtgaagttggaaaaatc
acatgggacgttgatagaagggagcttcctcagagattaccatttgcccactctatggtt
ttttctcatgactcttccaagttgatagtagcaggttgcgacagaaggatatatgttgtg
gatattgggaaaggtgaattagtacatacttttacaccccgtcgtgagcctcaagatgag
gaattgcctccaactgagccaccgataacaagattgttttctagttctgatgggcaatgg
ttggcagctgtgaactgttttggggatatatatgtatttaacttggagatacaaagccag
cactggttcatttcaagattagatggcgcctctgttacagctggtggatttccgccccaa
aatgacaatgttctgattgttacaacttcctcaaatcaagtctatgcacttgacgtagag
gcgaagcagttaggagaatggtcaaaacgacatacttttgctcttcctagaagataccag
gaatttcctggtgaagttattgggctttcattccctccagtagaagcttcatcttctcca
acggcaatatcatcttcagttgttgtttacagctccagggcaatgtgcttgattgacttt
gggttgcctgtggagcaagatgaaggtgataacactcaagattcgagggctgggaatttc
caatattttagtgttacgaagggaactaaacatagtaagaggaagtttgaagttttacca
atagagaagcctgttaggaggaactttcaagttctaccattagagaatcctgttttattt
ttagctcatacttcaaaaaattccttatttatagtagacaaaccctggttgcaagtggtc
aagagtttagaagccccaccagtccacagacatatatatgggacatga
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