Phaseolus vulgaris (common bean): 137816574
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Entry
137816574 CDS
T03093
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137816574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137816574
Spliceosome [BR:
pvu03041
]
Complex A
U1 snRNP components
U1 related factors
137816574
Complex B
137816574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
137816574
NCBI-ProteinID:
XP_068475870
LinkDB
All DBs
Position
1:complement(2647327..2661891)
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AA seq
1007 aa
AA seq
DB search
MANNSQPSSMQFRPVIQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPM
QQLTPRPMQPGHLAPSSQPIPMPYIQTNRPMSSIPPHSQSVPPLSNHMPGLPVSGAAPHS
SYTFTPSYGQQHDNANALAQYQHPPQMLAPPGGQPWLSSASQSVAPSTSVQPAGLQSSGA
TLTDAVTNATNQHSLSDWQEHTSGDGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWK
EFTSSDGKKYYYNKVTQQSTWSIPEELQLAREQAQKAANQGMQSETSDTPNAAVSSIATS
TATNAASLNPSLTSNGLASSPSSVTPIASTDSPQLVSGLFGTSVSQSTVTSSTTGVEPSS
VGTTSAAPILVAGGSGLSENSPQLSKMPPIVENQASQDFASANGSSPQDIEEAKKALAEV
GKNNVIPPEEKTNDDETLVYANKLEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYNA
LKTLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTSSMRWSKAISMF
ENDERFNAVERPRDREDLFESYMVELERKEKENAAEEHRRNIAEYRKFLESCDYVKVNSH
WRKIQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEQRRIQKDRVRRGERKNRDAFR
KLLEEHVATGILTAKTQWREYCLKVRDLPQYQAVASNTLGSTPKDLFELVAEDLEKQYHE
DKTLIKDTIKSGKIIVVTTSVFEEFKAAVLEDVACQTISDINLKLIFEELLERAKEKEEK
EAKKRQRLADEFTNLLYTFKDITTSSKWEDCKSLFEETQEYRSIGDESYSREIFEEYITY
LKEKAKEKERKREEEKVHDFMSQVKKEKEREEKRKEKEKKEKDREREKDKSKERHRKDET
DSDNQDMTEVHGYKEEKKKEKDKERKHRKRHQSSLDDVDSEKEDKEESKKSRRHGSERKK
SRKHANSPESDTENRHRRHKREHWDVSRKTGGHEELEDGELGDDVEN
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggccaataattctcagccctccagcatgcagtttcggccagtcattcaagctcagcaa
gggcaaccatttgttccaatgaattcacaacaatttggacctgcaggacatgctattcct
tcttcaaatgcgggaatgcctgtcattcaaggtcaacagttgcaatattctcaaccaatg
cagcagttgactccaaggccaatgcagcctggtcatcttgctccttcatcacaacctata
cccatgccatatatccagacaaacagaccaatgtcatccattccacctcattcacaatct
gttccccccttaagcaatcatatgcctggcttacctgtttctggagcagctccgcattct
tcatatactttcacaccatcctatggtcagcagcatgataatgcaaatgcattggcccaa
taccagcatccacctcaaatgcttgctcctcctggtggtcaaccttggctgtcgtctgca
tctcagagtgttgcaccttctacatctgtgcagccggctgggttgcaatcatctggagcg
acattgactgatgcggtaactaatgctactaaccagcactccttatctgattggcaagag
cacacttctggagatgggagaagatattactacaacaagaggacaaggcaatcaagttgg
gagaaacctttggaattgatgtcacctattgagagggctgatgcatcgactgtttggaaa
gaattcacttcttcagatggaaaaaagtattattacaataaggttacacaacaatcaacg
tggtcgataccagaggaacttcagttggctcgtgagcaggcacaaaaagctgcaaaccag
ggaatgcagtcagaaacaagtgatacacccaatgctgctgtctcatcaatagccacatca
acggcaactaatgcagctagcttgaacccttctttgacgtcaaatgggcttgcttccagc
ccatcttctgtcacaccaattgcatcaaccgattctccgcagttggtttctggattattt
ggcacctctgtttcacaatctacagttacctcaagcacaacaggtgttgaaccaagcagt
gtgggaactacaagtgctgcacctatactagtcgcaggaggctcaggactatccgagaac
tcacctcaactatccaaaatgccacccattgttgaaaatcaagcatctcaagattttgct
tctgcgaatggatcttctcctcaagatattgaggaagctaaaaaagcattggctgaggtt
gggaaaaataatgtgattccacctgaggagaaaaccaatgatgatgaaaccttggtatat
gcaaataagctggaagcaaaaaatgcatttaaagcgcttctggaatctgtgaatgttcag
tctgattggacctgggaacaggcaatgagagaaatcatcaatgacaaaagatataatgcc
ctgaaaacgcttggtgagcgaaaacaagcttttaatgagtatttgggccaaaggaagaag
ctggaggctgaagagagacgcatgaagcagaaaagagcccgcgaagaattcacaaagatg
ttggaagaatgcaaggaacttacatcctccatgagatggagcaaagccattagtatgttt
gaaaatgatgaacgatttaatgctgttgaaagaccaagagaccgagaagatttatttgaa
agctacatggtggaacttgagaggaaggagaaggaaaatgcggcggaggagcacaggcgg
aatatagctgaatatagaaaatttctagagtcttgtgattatgtgaaggtgaatagtcat
tggcgtaaaatccaagatcggctagaggacgacgatagatacttgcgacttgaaaaaatt
gatcgcttgctagtttttcaggactatattcgggacttggagaaagaagaggaggaacaa
agaagaatacagaaggatcgagtccgacggggtgaaaggaaaaaccgtgatgcttttcgc
aagttgcttgaagaacatgttgctactggaattcttactgctaaaactcaatggcgagaa
tattgcttgaaggtcagggatttacctcaatatcaagccgttgcatcaaatacattgggt
tccaccccgaaggatttgtttgagcttgttgcagaggatcttgagaaacagtatcatgaa
gacaagacactcataaaagatacaattaagtcaggcaagataattgtagtgactacatca
gtatttgaggagtttaaggctgctgtgttggaagatgttgcatgccaaacaatatctgac
atcaatttaaagcttatatttgaggagttgttagagagagctaaagagaaggaagagaaa
gaagccaagaagcgccaacgccttgctgatgagtttactaacctgttatacacattcaag
gatattactacttcctcaaaatgggaggattgcaagtcactttttgaggagactcaagag
tacaggtcaattggggacgaaagctatagcagagaaatttttgaggaatacatcacatac
ttgaaggaaaaagctaaagagaaggaacgtaagcgtgaagaggagaaggtgcatgatttt
atgtcacaggtcaaaaaggagaaagaaagggaagagaaacggaaggagaaggagaaaaaa
gaaaaagaccgagaacgcgaaaaggataagtcaaaggaacgccataggaaggatgaaacc
gatagtgataaccaagacatgactgaagtccatggttacaaagaggagaagaaaaaagaa
aaggataaggaaaggaagcatcggaaaaggcatcagagcagcttagatgacgtggattct
gaaaaggaagacaaggaagaatctaaaaaatcacgaaggcatggcagtgaacgcaagaag
tctaggaagcatgcaaactctcctgaatcagacactgaaaaccggcacagacgacacaag
agggagcactgggatgtatctaggaaaactggggggcatgaggaacttgaagacggagag
ctcggcgacgatgttgaaaactaa
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