Entry
Name
(RefSeq) histone deacetylase 2 isoform X1
KO
Organism
pvu Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:pvu00001 ]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:pvu03036 ]
137816621
Enzymes [BR:pvu01000 ]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
137816621
Chromosome and associated proteins [BR:pvu03036 ]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class IV HDACs
137816621
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
1:complement(3254345..3261476)
Genome browser
AA seq
398 aa AA seq DB search
MQWVRKVYFWIIRVISHSIFGACMKLVNRVSEFSKKNISDSSPPPLLSLSMSSSSVNDTE
ALRRNRILSSKLYFDVSPSKVPLIYSESYDIAFLGIEKLHPFDSSKWGRICRFLVSFGIL
DKKCIVEPLEASKDDLLVVHTELYLNRLKESSKVAMIVEVPPVALIPNCLVQQKLLSPFR
KQVGGTVLAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFVRLNISRVM
IIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTVTEEYLQ
KLDEALEVAGRRFNPELVIYNAGTDILEGDPLGRLEISPEGIALRDEKVFRFARERNIPI
VMLTSGGYMKSSARVIADSIVNLSKKCLIETSGAPKSS
NT seq
1197 nt NT seq +upstream nt +downstream nt
atgcaatgggtaagaaaagtgtatttctggataattcgagttatctcacattccattttc
ggtgcatgcatgaaattggtcaaccgagtgtccgagtttagcaagaagaacatctccgat
tcttcaccaccgccattgttatcgctgtcgatgtcgtcttcttccgtgaacgacaccgag
gctctccggcgcaatcgcatcctctccagcaagctctacttcgacgtgtctccgtccaag
gttccgctaatctactccgagtcctacgacatagcgtttctcggcatagagaaactgcat
ccgtttgattcgtcgaagtggggacgcatttgccgattcctcgtttcgtttggtattctc
gacaaaaaatgcatcgttgagcctctggaagcttccaaggatgatcttctagtggttcac
actgaattgtatctgaataggctgaaggagagttcaaaagttgctatgatagttgaggtc
cctcccgtggcattaattcccaattgtcttgtgcaacaaaaacttctttccccgttcagg
aagcaggttggaggaactgtactggctgcaaaacttgcaaaggagagaggatgggccatt
aatgttggaggaggttttcatcactgctctgcagaaaaaggaggtggattctgtgcttat
gcagatatttctctttgcatccactttgcttttgttcggttgaatatatcaagggtgatg
atcattgatcttgatgcacatcaaggaaacggtcatgaaatggactttgcctatgatagc
cgagtctatatcttggatatgtacaatcctggaatatatcctttggattacgaggctaga
aactacataaatcagaaagttgaagtaaagagtgggacggttacagaagagtacctgcaa
aaattagatgaagcactagaggttgctgggcgtaggtttaaccctgagttggtaatttat
aatgctggaaccgacatcctagaaggagatccattaggaaggttggagatcagtcctgaa
ggaattgcccttagagatgaaaaagttttccggtttgctcgtgagagaaacattcccatc
gtcatgctcacttcaggtggttacatgaaatctagtgccagagtgattgcagattcaata
gtcaatctttccaagaaatgcttgatagaaaccagtggagctccaaagtcttcgtga