Phaseolus vulgaris (common bean): 137816692
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Entry
137816692 CDS
T03093
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137816692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137816692
03036 Chromosome and associated proteins [BR:
pvu03036
]
137816692
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137816692
Coactivators
SAGA/TFTC/STAGA complex
137816692
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
137816692
STAGA complex
137816692
TFTC complex
137816692
SAGA complex
137816692
SLIK complex
137816692
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
DSE1_N
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_SCAP
Beta-prop_RIG_2nd
PAC11
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_NOL10_N
ASA1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_Vps41
Ge1_WD40
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
PALB2_WD40
PH_29
Motif
Other DBs
NCBI-GeneID:
137816692
NCBI-ProteinID:
XP_068476046
LinkDB
All DBs
Position
1:complement(4125103..4139036)
Genome browser
AA seq
659 aa
AA seq
DB search
MDEDQIEGCVSGYLKQKGFAQNDDQLQLSNTDSSLQPDTLNRAQLERGSARYHDGYGRLR
SWAYRSLESYKHELLRVLYPVFIHCFMDLVSKGHLQEAWNFFNTFREDHEMMHSRDLQKL
ELVLSPAHLVEMEFAHSLRQSKFNIKICRYSYELLLQHLHSMQSSTIIGIINEHVGFQVT
AGQPSSISDDPEAVTLSGSIQDAANKINQKEILWGMFEDSVEDHIDKSGALLSGTEKGEG
EGKEGDNDESKKRSIDVGKQGNSVKKVKKEKVSSATGKNAKPEANTISAAPRIKPELPLP
TVSTDVELSILEDLRNRVQLSSVALPSVNFYTFVNTHNGLSCSSISHNGSLLVGGFSDSS
LKVWDMAKLEQQSTTYFSHGGNDTSQNEHIIGQNSGRRQYTLFQGHSGPVYAATFSEAGD
FLLSSSADKTIRLWSTKLNANLVCYKGHNYPIWDVQFSPAGHYFASCSHDRTARIWSMDR
IKPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQSGECVRVFIGHRSMILSLA
MSPDGRYMASGDEDGTIMTWDLSSGCCVTPLVSHTSCVWSLAFSCEGSLLASGSADCTVK
LWDVTTGIKVPRNEENRSGNTNRLRSLKSLPTKSASVYSLQFSRRNLLFAAGALAKSGF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatcaaatagaaggctgtgtgagtgggtacctcaagcagaaagggtttgcg
caaaacgatgaccaacttcaactttccaacaccgattcctctcttcaacccgacactctc
aatcgtgctcaattggagagaggttccgctagataccatgatgggtatggaagactaaga
tcatgggcatacagatcacttgaatcatacaagcatgagttgctgcgtgtgctttatcca
gtatttatccattgcttcatggatcttgtgtcaaaagggcatcttcaggaagcttggaac
tttttcaatacctttcgtgaagaccatgaaatgatgcactcacgggaccttcagaaattg
gaactagttctttctcctgctcatttggtggaaatggaattcgctcattcccttaggcag
agtaagttcaacataaagatatgtcggtattcttatgagcttctactgcaacatctacat
agtatgcaatcaagcacaataattggtattatcaatgagcatgttggcttccaagttaca
gctggacaaccgagctcaatttctgatgatccagaagctgttaccctcagtggaagcatc
caggatgcagcaaacaagataaatcagaaagaaatactctgggggatgtttgaagattct
gtagaagaccacatagataagtctggggccttgctttcaggcacagaaaagggtgaaggt
gagggcaaagagggagacaatgatgagagtaagaaaaggtcaattgatgtaggaaagcaa
ggtaactctgtaaaaaaggtaaaaaaggagaaggtcagcagtgcaacagggaaaaatgct
aaaccagaagctaacactatatctgcagcacctcgcattaaaccagagctacccttgccc
acagtttcaactgatgtagaactgtccatcctagaagatttaaggaatcgtgtacaattg
agtagtgttgctctcccttcagttaacttctacacatttgtaaatacacataatggttta
agctgttcatcaatatcccacaatggatcattgcttgttggaggattttctgactcgtca
ctaaaggtctgggatatggcaaaacttgagcaacaatccaccacttatttttcgcacgga
gggaatgacacatcacaaaatgaacacattattgggcaaaatagtgggagaagacagtac
acattgtttcaaggtcattcaggtccagtctatgcagccacttttagtgaagccggggat
tttcttctttcctcttcagccgacaaaacaattcgactatggagtacaaagcttaatgcc
aatcttgtttgttacaagggtcacaattaccctatctgggatgttcagtttagtccagca
gggcattattttgccagctgttcacatgacagaactgccaggatttggtctatggacaga
ataaaacctctaagaataatggcaggacatttgtcagatgttgattgtgtgcagtggcat
cccaactgcaactacattgctactggctccagtgacaaaacagttcgactgtgggatgtg
cagagcggggaatgtgttcgggttttcattggtcatagaagtatgattttgtctttggca
atgtcccctgatgggcgctatatggcatctggtgatgaagatggcacaatcatgacgtgg
gacctctctagtggctgttgtgtcacacctctagtcagtcacacctcatgtgtctggtca
ctcgctttcagttgtgaaggttctcttctagcatctggatctgctgactgcactgtcaaa
ttgtgggatgttactacaggtataaaggttccaaggaatgaagaaaatagaagtgggaat
actaacagactcagatcattaaaaagcctgccaaccaaatctgcttcagtttactctctc
cagttttctcgcaggaatcttctttttgcagctggagctcttgcaaaaagtggtttttag
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