Phaseolus vulgaris (common bean): 137816985
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Entry
137816985 CDS
T03093
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
pvu03015
mRNA surveillance pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137816985
09122 Translation
03013 Nucleocytoplasmic transport
137816985
03015 mRNA surveillance pathway
137816985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137816985
03041 Spliceosome [BR:
pvu03041
]
137816985
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137816985
TREX complex
137816985
Spliceosome [BR:
pvu03041
]
Complex C
Other components
EJC/TREX
137816985
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137816985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
137816985
NCBI-ProteinID:
XP_068476277
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MSAALDMTLDDIIKNNKKSASANTRGRGRASGPGPARRLPNRAGNRPAPYAAAKAPESAW
QHDMYADQGVATAFAGQGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLKRHTVH
YDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAVPPVNGTF
GNSGGPPRSGQGRSGLLGRPRGAPRGRGSSRRGRGGRGRDRDEKVSAEDLDAELEKYHAE
AMQLN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgctctggatatgacgctcgacgatattataaaaaacaacaagaagtcagcc
tccgccaacaccaggggccgaggccgagcttcgggacccggacctgctcgtcgtcttccc
aaccgtgccggaaatcgtcctgcgccgtacgcagcagctaaggcgccggagtctgcgtgg
cagcacgatatgtacgccgatcagggcgtcgccacggctttcgcaggtcaaggtggtcgg
gcctcttccatcgaaacagggacgaagctttatatatctaatctggattatggggtttcc
aatgacgatattaaggagttatttcttgaagttggtgacctgaaacggcacactgttcac
tacgacaggagtggaagatcgaagggtacagcggaagtagttttctctcgaagagctgat
gctgtagctgcagtgaagaggtatcacaatgttcagctagatgggaaaccaatgaaggta
gagatcgtggggacaaatattgctacacatgctgcagtacctcctgttaatggaactttt
ggaaattctggaggacctcccagaagtggacaagggagaagtgggctactaggaaggcca
cgtggtgcacctagagggcgaggtagcagtcggaggggtcgaggaggacgtggtagagat
cgtgatgaaaaggtatctgctgaagatcttgatgctgagttggagaagtatcatgctgag
gctatgcaattgaactga
DBGET
integrated database retrieval system