Phaseolus vulgaris (common bean): 137816999
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Entry
137816999 CDS
T03093
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137816999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137816999
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137816999
Spliceosome [BR:
pvu03041
]
Complex C
Other components
Step II factors
137816999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_24
SLFN-g3_helicase
nSTAND3
AAA_30
Flavi_DEAD
AAA_16
T2SSE
Sigma54_activ_2
TMEM247
ABC_tran
cobW
Motif
Other DBs
NCBI-GeneID:
137816999
NCBI-ProteinID:
XP_068476292
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MEKDRACSEVVDINKTTTTLEPEKPTRGGLCVSGKDRVVYVPQERKSRLGLDALASAKRG
GTHYDGGFKLPKERTISIAASAEDEDKSESTVVEESEQGAIVSTHRHTRRYRETTHAGSS
VTEDHYGDTSKIRSTEQVVSNVPPSPSGGYDREDNRNERRHFRDDSRTGSGRVRHRNYYE
SKGGSYSERDSHSRYDRDNGRKRSRYEDSRRTPGRSDWDDGRWDWGESPRRDSVSSSRRH
QPSPSPMFLGASPDARLVSPWLGGNTPHSSFNSSSPWDHVSPSPIPIRASGYSAKSSSVS
RHSGRSHQLNFSSESSNTFQDEVADKSDLGEDHKYEITESMRLEMEYDADRAWYDREEGG
TLFDGDNSSLFLGDEASFQKKEAELAKRLVRRDGTKMSLAQSKKLSQLTADNAQWEDRQL
LRSGAVRGTEIQTEFDDEEEHRVILLVHDTKPPFLDGRVVFTKQAEPIMPLKDPTSDMAI
ISRKGSTLVREIHEKQSMNKSRQRFWELAGSKLGDILGVEKTAEQIDADTAEVGEDGEID
FKEEAKFSQHLKKGGEAVSDFAKSKTIAEQRQYLPIFSVREDLLQVVRENQVVVVVGETG
SGKTTQLTQYLHEDGYTIGGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDV
TGPSTIIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLNTDVLFGILKKVVAQRRDF
KLIVTSATLNAQKFSNFFGSVPIYNIPGRTFPVNILWSKTPVEDYVEGAVKQAMTIHITS
PPGDILIFMTGQDEIEAACYALAERMEQMMSSSNKVVPKLLILPIYSQLPADLQAKIFQK
AEDGARKCIVATNIAETSLTVDGIFYVIDSGYGKMKVYNPRMGMDALQVFPVSRAAADQR
AGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMD
PPPQDNILNSMYQLWVLGALNNVGGLTELGWKMVEFPLDPPLAKMLLTGDLLGCLEEVLT
IVSMLSVPSVFFRPKDRAEESDAARERFFVPESDHLTLYNVYQQWKQHDYRGDWCNDHYL
HVKGLRKAREVRSQLLDILKTLKIPLTSCWPDTDIVRKAICSAYFHNAARLKGVGEYVNC
RNGMPCHLHPSSALYGMGCNPEYVVYHELILTTKEYMQCATAVEPQWLAELGPMFFSVKD
SDTSLLEHKKKQKQEKTAMEEEMENLKKVQAEVERERKQKEKEKTAKRQQQISMPGLQKG
SSTFLRPKKFGL
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagatagagcttgttctgaagtggttgacataaacaagactactacgacactg
gaaccagaaaaacctacccgtggtggactctgtgtttctgggaaggatagagtggtttac
gtgcctcaagagagaaaatctcgtttaggacttgatgcccttgccagtgcaaaacgggga
gggactcactatgatgggggattcaagttgccaaaagaaagaaccatatccattgctgca
tctgcagaagatgaagataagtctgagtcgactgttgttgaagagagtgaacagggtgcg
attgtcagcacacacagacacactaggagataccgtgaaactacacatgcaggaagttct
gtgaccgaagatcactatggtgataccagcaagattcgttcaactgagcaagtggtctca
aatgttcctccatcaccttcaggaggatatgacagggaggataacaggaatgagaggagg
catttcagggatgattcaagaactggtagtggaagagtgcggcatcgtaactactacgag
agtaagggaggatcttattcagaaagggattcacatagtaggtatgaccgtgataatggt
agaaagcgaagcagatatgaagattccaggagaacacctggcaggtctgactgggatgat
ggcaggtgggattggggtgaaagtccacggagggacagtgtctctagttctagacgtcat
caaccttcaccatccccaatgtttttaggtgcctcaccggatgctcgattagtttcacca
tggttggggggcaacacacctcattcatcctttaattcatcttccccctgggaccatgtt
tctccatctcctatcccaatacgtgcttctggatattcagccaaatcttcttctgtttct
agacacagtggacgatcacatcagctgaatttttcatctgaatcttcaaatacgtttcag
gatgaagtggcggataagtctgatttgggtgaagaccacaagtatgagattactgaaagc
atgcgtttggagatggaatacgacgctgaccgagcatggtatgacagagaggaaggtggc
acattgtttgatggcgataactcatcactttttcttggagatgaagcttcctttcagaaa
aaagaggctgagttggccaagagactggttagaagagatgggaccaagatgtcccttgca
cagagcaagaagttgtcccagctgacagctgataatgctcaatgggaggataggcaactg
ctgagatctggagctgttagaggtacagagattcagactgaattcgatgatgaggaagag
cacagagttattcttcttgttcatgatacaaagcctcctttccttgatggcagagttgtt
ttcactaagcaggctgaaccaattatgccattaaaagatccaacatctgacatggctata
atatctcgtaaagggtctaccctggttagagaaatccatgagaagcagagtatgaacaag
tctcgccaacgcttttgggagcttgcaggctcaaagcttggtgatatcttgggcgttgag
aaaacagcagagcagattgatgcagacactgctgaagtgggtgaagatggggaaattgat
tttaaggaggaggctaagttttcacagcatttgaagaaggggggagaagccgtgagtgac
tttgctaagtcaaaaaccattgcagagcaaagacaatatctgcctattttttcagtgaga
gaagatttattacaggtggttcgtgaaaatcaggtggtggtggtggttggagaaactggt
tcaggaaagacaacacaattaacacagtatctgcatgaggatggttatactataggtggt
atagtgggttgcacccaaccaagacgtgtggcagctatgagtgttgccaagagagttagt
gaagagatggatacagagttgggtgataaagttggctatgcaatacgttttgaagatgtg
actgggccaagtaccattataaagtacatgactgatggtgtacttctacgtgaaacacta
aaagattctgatctagacaagtaccgggttattgtcatggatgaagcccatgaaagatca
ttaaacactgatgttctttttggaatattgaagaaagttgtagctcaacgtcgtgatttc
aagctgatcgttacatctgcaactctgaatgcacagaaattttcaaatttttttggaagt
gtaccgatttataacattcctgggcgaacatttcctgttaatatattatggagtaaaact
ccagttgaagattatgttgaaggtgcagtgaagcaggctatgactattcatataaccagt
cctcctggtgacatccttatcttcatgactggccaggatgagattgaggcagcttgttat
gcccttgcagagagaatggagcagatgatgtcgtcttcaaataaagttgttccaaaactc
ttgattcttcccatatactctcagcttcctgccgatttacaagctaagatatttcagaaa
gctgaagatggagcccgaaaatgcattgtagccactaatattgctgagacatcattaact
gttgatggtatcttctatgtgatagactcaggctatggtaaaatgaaggtgtataaccct
aggatgggcatggatgctctccaggtcttccctgttagccgtgctgctgctgaccagcgt
gctggtcgagctggtagaactggccctggtacatgctataggttgtatactgagagtgct
tacttaaatgaaatgctgcccagtcctgttccagagattcagaggactaaccttggtaat
gtggtcttgttgctaaaatctctgaaagttgaaaatctacttgattttgatttcatggat
ccacctccgcaagataatattctcaattcgatgtaccaattgtgggtgctgggtgcgctt
aacaatgtggggggattaactgagcttgggtggaaaatggttgaatttccgcttgaccct
ccacttgccaagatgcttttgacgggtgatctgttagggtgtcttgaggaggttttgaca
attgtttccatgctttctgtgccatctgttttcttcagacccaaggatcgggcagaggag
agtgatgccgcgcgggaaagattttttgtgccagagtctgatcatttaaccctgtacaac
gtttatcagcaatggaaacagcatgattacagaggtgattggtgcaatgatcattacttg
catgtcaaaggtttaagaaaagctagagaggtgagatcccagttgcttgacatcctcaag
actttaaagatccccttaacctcatgttggcctgatacagacattgtcagaaaagcaatt
tgttctgcatattttcacaatgcagcaaggttaaagggtgtgggagagtatgttaactgc
cggaatgggatgccgtgtcatcttcatcccagtagtgctctctatggtatgggctgcaat
cctgagtatgtggtttatcacgagttaatcctgaccacgaaggagtacatgcagtgtgcc
acggcagtggagccccagtggctggctgagttgggacccatgtttttctctgttaaggat
tctgatacatcattactggagcataagaagaaacagaaacaagagaaaacagccatggag
gaggagatggagaacttgaagaaggtacaggcagaggttgagagagaaaggaaacagaag
gagaaggaaaagacagctaagcgtcagcagcaaatctccatgccaggattacaaaagggt
tcttccacattcttgagaccaaagaagtttggtttgtaa
DBGET
integrated database retrieval system
