Phaseolus vulgaris (common bean): 137818148
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Entry
137818148 CDS
T03093
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137818148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137818148
03009 Ribosome biogenesis [BR:
pvu03009
]
137818148
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137818148
Spliceosome [BR:
pvu03041
]
Complex A
U1 snRNP components
U1 related factors
137818148
Complex B
137818148
Ribosome biogenesis [BR:
pvu03009
]
Eukaryotic type
Pre-60S particles
Helicases
137818148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
137818148
NCBI-ProteinID:
XP_068477502
LinkDB
All DBs
Position
10:42180616..42189191
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AA seq
507 aa
AA seq
DB search
MSRYDSRSSDPTSYRDRRSDSGLGASTGFGGPVQHSSSNKRDHDDGGSPKRNLSLDGLPH
FEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFQDAGFPEYVLQEITKAG
FTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVL
APTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE
SNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKF
LYNPYKVIIGSEDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCD
QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVIN
YDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMG
RGAPPLPSGPRGFQDRGRGYGSSRPWS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccagtgaccctacttcctaccgtgaccggaggagtgat
tctggcctaggtgcatctacagggtttggtggtcctgtacaacactcttcatcaaacaag
agggatcatgatgatggtgggtcaccaaagaggaacctcagtttggatggtttacctcat
ttcgagaaaaacttctacattgagtcaccggcagtaagggcaatgacagatgctgaggtt
aatgagtaccggcagcagagggaaataactgttgaaggtcgagatatccccaagcctgtc
aaaacctttcaagatgctggttttccagaatacgtgttgcaagaaattacaaaagctggc
tttactgaacctacacccattcaatctcaaggttggcccatggctttgaaggggcgtgat
ctgataggaatagcagaaacaggttcggggaagacacttgcttacttgttacctgccatt
gtgcatgttaatgctcagccgattctagatcctggagatggacctattgtgttagtattg
gctccaactcgtgaacttgctgttcaaatacaacaagaggctactaaatttggtgcatcg
tctaggattaagagtacatgtatctatggtggggttccgaagggacctcaggtgcgtgat
ctccagaaaggtgtcgaaattgtaattgccactcccggaaggttaattgatatgcttgaa
tcaaatcatacgaacttgcagagggtcacatatcttgtattggatgaagctgataggatg
ttggatatggggtttgatcctcagctgcggaagattgtttctcagattcggccggaccgt
caaactttgtattggagtgctacctggccgaaggaggtcgaacaattggcacggaagttc
ctttataacccatacaaagtaattatagggtctgaagatttaaaagctaaccatgcaata
cgtcaatatgttgacattgtttcagaaaagcagaaatatgataaattggtgaagttgcta
gaggacatcatggatggcagtcgaatactgatattcatggataccaaaaaaggatgtgat
cagatcactaggcaactccgcatggatggctggcctgcactttcaattcatggagacaaa
agtcaagcagaaagagattgggttctctcagaatttaaatcgggaaaaagtcctattatg
actgcaacagatgttgcagcccgtggtttagatgtgaaggatgtgaaatatgtaataaat
tatgacttcccggggtcacttgaggactatgtccatcgcattgggcgaactggaagagct
ggtgcaaaaggaactgcctacacattcttcacagctgcaaatgctagatttgcaaaggaa
cttatcgccatacttgaggaagctggacagaaagtgagtcctgaattagcagcaatgggg
cgtggtgcaccacctctgccttcaggtccccgaggtttccaagaccgtgggaggggttat
ggcagttctcgtccatggagctaa
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