KEGG   Phaseolus vulgaris (common bean): 137818274
Entry
137818274         CDS       T03093                                 
Name
(RefSeq) protein PAT1 homolog
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137818274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137818274
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137818274
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     137818274
SSDB
Motif
Pfam: PHD_NSD
Other DBs
NCBI-GeneID: 137818274
NCBI-ProteinID: XP_068477690
LinkDB
Position
11:48531121..48540535
AA seq 882 aa
MAGFGAAATTTRDHRPLGHTSKEGEVFDASQYAFFGKNVAEEVELGGLEDQDEYKAMLAV
EFNEEDLFLNKEEAEDIRSLSDIDDLTTTFLKLNKVVTGPRSPGVIGERGSRENSSASEW
SQRDDIPYWFDQHSYDSEGQGSQDGNRWSSHPHSSVAQLHDSKPLYRTSSYPEQQRQLQH
QLQHCSSEPVPNWFDQHFYDSENTEDGNRWSSHPHSSTAQLQESKTLYRTSSYPDKRQEL
TRFSSEPILAPKSSFTSYPPPGGRSQQSSPNHSTGHLNIPFHAGGAHVALPSQNRSHYFN
SALQLSGSKHESHFSGNVRPFTTGSPLNYRMQNPWVNQSGLYSGDHPNLSSMLQQQLHHQ
SGSLSPHLLTQLQQQQQHRLLHPIQKSGRYMSGFQSHLFNPQLCSGSSMVSKYDHMLGLA
DTREHRPKSTNKGKQSHRFLQQGSDASSQKNESGSVQFRSKYMTSDEIESILRMQQAVTH
CNDPYLDDYYHQACLAKKAGAKLKHSFSPTQIKELPPRARANLDSHGFLQVDTLGRVSFL
SIRRPQALLEVESSNSSTSGSSERNISEKPLEQEPLFAARVTIEDGLCLLLDVEDIDRFL
QCNQLQDGGAQLRRRRKVLLEGLATSLQLVDPLGKNGNKVGLGAKDDVVFLRLVSIPKGR
KLISKYLQLLVSGSELMRIVCMTIFRHLRFLFGSLPSEPEAAMTTSDLSKIVCKCVQGMD
LGALGACLAAVVCSSEQPPLRPLGSTAGDGASLILVSVLERATELLTDPHGGCSYIANRS
FWQASFDEFFGLLTMYCMNKYQSIMQSLLVQGTPNVSVIGSDAAKAISREMPVELLRVSL
PHTNDHQRKLLLDFAQRSVPVVGFNNYTGSSGGHVNSETVLS
NT seq 2649 nt   +upstreamnt  +downstreamnt
atggctgggtttggtgccgctgctaccaccacccgtgatcacagaccattgggacacact
tccaaagaaggtgaagtatttgatgcatcacagtatgcattctttggtaaaaatgttgct
gaggaagttgagttgggggggttagaagatcaggatgagtataaggccatgcttgctgtg
gagttcaacgaggaagatttatttctcaataaagaagaggcagaggatataagatcactt
tctgatattgatgatctcaccaccacttttttaaagttgaacaaggttgttactggacca
agaagcccaggagttattggtgaacggggatcaagagaaaattcctctgcttctgaatgg
tcacaaagggatgacattccctactggtttgatcagcatagctatgacagtgaagggcaa
ggatctcaggatggcaatagatggtcatcacacccccattcttctgtagctcagctacat
gactcaaagcccttgtacagaacatcttcatatcctgagcagcagcgacagctgcaacac
caactccaacattgctctagtgaacctgttcctaactggtttgatcagcatttttatgat
agtgaaaatactgaggatggaaaccgatggtcatcacatccacattcctccactgcccaa
ttacaagaatcaaagaccttgtatagaacatcttcttatcctgacaagagacaggaactt
actcggttttctagtgaacctattttggcaccaaaatcttcatttacttcgtatcctcca
cctggtggtaggtcccaacagtcttccccaaatcacagtacaggtcacttgaacattcct
tttcatgctggtggagctcatgtggctttgccgtcacaaaatcgttctcattatttcaat
tctgcactacagttgagtggatcaaaacatgagtcacattttagtggaaatgtgcggcca
tttacaactggctccccactaaattatcgaatgcagaatccctgggtcaaccaatctggg
ttgtattctggagatcatccaaacctcagtagtatgttgcagcaacaattacaccatcag
agtggatcattatcacctcatctattgacccaattgcagcagcaacagcagcatagactg
cttcatcccattcagaaatcaggacgctacatgtcaggtttccaatcccatttatttaac
cctcagctttgttctggatcatccatggttagcaaatatgatcatatgcttggtcttgct
gataccagagaacacaggccaaagtcaacaaataagggtaaacagagtcatcgttttttg
caacaaggttctgatgccagtagccagaagaatgaaagtggttcagtacagtttaggtcc
aagtatatgactagtgatgaaattgagagtattcttagaatgcagcaagctgtgactcat
tgcaatgatccctatcttgatgactattatcaccaagcttgtcttgctaaaaaagctggg
gctaagttgaaacattcatttagcccaacacaaataaaggaacttcctccacgagcccgt
gccaatctggactcccatggttttcttcaggttgatactttagggagggtttcattcctg
tctattcgtcgacctcaggctcttcttgaagttgaatcatcaaactcttcaactagtggt
agttctgaacgtaatatttcagagaagccccttgaacaggagcctctgtttgcagccaga
gtcacaattgaggatggtctttgtcttcttcttgatgtagaggatattgatcgttttcta
cagtgtaatcaactacaagatggtggggctcaattaagacgaagacggaaggtccttttg
gaaggactagcaacatctctccaacttgttgatccactgggaaagaatggaaacaaagtt
gggcttggtgctaaggatgatgttgttttcttacgattagtatctatacccaaaggtcgt
aaactcatttcaaagtatcttcagctacttgtttctggtagtgagcttatgcggatagtc
tgcatgaccatctttcgtcatttgagatttttatttggtagtctaccatctgaacctgaa
gctgccatgactacaagtgacctttctaagattgtttgtaagtgtgttcagggaatggat
cttggtgccctaggtgcttgtcttgcagctgtggtttgttcctcagagcaacctcctcta
cgtccccttggaagcacagctggagatggtgcctccctcattttagtatctgttcttgag
agggccactgaacttcttacagatccccatggtggttgcagctatatagccaatcgttca
ttttggcaggcctcatttgacgaattttttggccttctcacaatgtattgcatgaataag
taccagagtatcatgcaatcactgcttgtacaagggacgccaaatgtgtctgtaattgga
tcagatgctgctaaagcaattagtagggaaatgcctgttgaactcttaagggtaagtctt
cctcacaccaatgaccaccagaggaaattgttactagattttgctcagcgctcggtgcct
gtggttggatttaacaattataccgggagcagtggtggtcatgttaactcagagactgtg
ctaagttga

DBGET integrated database retrieval system