Phaseolus vulgaris (common bean): 137818286
Help
Entry
137818286 CDS
T03093
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137818286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137818286
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137818286
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137818286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
137818286
NCBI-ProteinID:
XP_068477710
LinkDB
All DBs
Position
10:complement(43899119..43900806)
Genome browser
AA seq
283 aa
AA seq
DB search
MPLILPKSDSIQIREVWNDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYD
YHYQTLKDNVDMLKLIQLGLTFSDEYGNLPTCAGAGDVDEESHSCCIWQFNFREFNVNED
VFANDSIELLRQSGIDFKKNNEDGIDAHRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLL
KLLTCQNLPDTQVEFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERIGICHQ
AGSDSLLTSCTFRKLKDNFFSGSLEKYAGVLYGLGVENGQGAH
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgattttacccaaaagcgattcgatccagattcgcgaggtgtggaacgataac
ctggaagaggaattcgcgttgattcgcgaaatcgtggacgattacccgtacatcgcgatg
gacacggagtttccggggattgttctccgaccggtggggaatttcaagaacagctacgat
taccattaccaaaccctaaaggacaacgtagacatgctaaagctcatacaattggggctc
accttctccgacgagtacggcaaccttcccacgtgtgccggcgcaggggatgtcgacgag
gaatcgcattcgtgctgcatctggcaattcaatttccgggagttcaacgtgaacgaggac
gtcttcgcgaacgattccatcgagcttttgcgccagagcgggatcgatttcaagaagaac
aacgaggacggcatcgacgcgcaccgtttcggggagcttctcatgtcgtccgggatcgtt
ttgaatgacaacgttcattgggttactttccatagcggttacgatttcgggtacttgttg
aagctcttgacgtgtcagaatttgcccgatacgcaggtggagttcttcaatctgatcaac
atgtattttcccaccgtatatgacatcaagcacctcatgaagttctgcaacagccttcac
ggcggtttgaacaagcttgccgagttgttggaggtcgagaggattgggatttgccatcag
gcgggttccgatagtttgcttacttcgtgtacgttcaggaaattgaaggacaatttcttt
agtggctctttggagaagtatgctggtgtcttgtatgggttaggtgttgagaatggacag
ggagcccattga
DBGET
integrated database retrieval system
