Phaseolus vulgaris (common bean): 137818406
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Entry
137818406 CDS
T03093
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137818406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137818406
03036 Chromosome and associated proteins [BR:
pvu03036
]
137818406
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137818406
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
137818406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
TARSH_C
Motif
Other DBs
NCBI-GeneID:
137818406
NCBI-ProteinID:
XP_068477915
LinkDB
All DBs
Position
10:complement(40773036..40794588)
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AA seq
1081 aa
AA seq
DB search
MEEEMAMDTSPNPGDSYFDPQNLSSRQQFRRYGKRHSTSGASIPPDNLASKLSETGLLYD
GQSIHSPTNAALVLENIKQEVESLDADYLEEKTSYSTRRRLSADFPGVDPGFDSVRYSLK
ACKTEGDTLGDGADTIFTLFASLLDSSLQGLMPIADLILRVENACRNVSESIRYGLNVRH
RVVEDKLMRQKAQLLLDEAATWSLLWFLYGKGTEELSKDQILVSGTSHVVACEFVAEDHT
AQLCLRIVQWLEGLASKALDLEAKVRGSHVGSYLPNCGVWHHTQRYLKKGTLDMNVVHHL
DFDAPTRENANLLPDDKKQDESLLEDVWTLLRAGRLEEACGLCRSAGQPWRASSIYPFGG
LKQFPSVEVLVKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKIAEQGGKCEAAVYAA
QCSNLKRMLPLCNDWESACWAMAKSWLDVQVDLEITRSLPGGVDQLRTFGDVIDGSPGHA
DGSFEPSNGPENWPIQVLNQQPRQLSSLLQKLHSGEMIHESVTRQCKEQQRQIQMTLMLG
NIPRVLDLIWSWIAPTEDNQNVFRPCGDPQMIRFGAHLVLVLRYLLAEEMKDTFKDKILS
VGDNILHLYALFLFSKEHEELVGIYASQLACHRCIDLFVHMMELRLHSSVHVKYKIFLSA
MEYLPFSSVDDSKGNFEDITERILARSREIKVGKYDNLSDVAEQHRLQSLQKAKVIQWLC
FTPPSTITNVKDVSKKLLLRALVHSNILFREFALISMWRVPAMPIGAHTVLGFLAEPLKQ
FAEALETSEDYNVFEDLREFQDWREYYSCDATYRNWLKIEVENAEVPVTEISLEEKERSI
SAAKETLKASLSLLQRKETPWLASTGRMYESAEPVFLELHATAMLCLPSGECLCPDATVC
TTLTSALYSSAGDEVVLNRQLMVNVSISSRDSYCIDVVLRCLAIPDDGLEPHELNDGGIL
GTILASGFKGELPRFQAGVTMEISRLDAWYSDKDGPLECPATYIVKGLCRRCCLPEVILR
CMQVSVSLMGSGVLPDCHDTLIELVGSPETDFLHLFSQQQLQEFLLFEREYSICKMEITE
E
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaatggcgatggacacttctcctaatcccggtgacagctacttcgatcct
cagaacctctcttcgcgacagcagtttcgcagatacgggaagaggcattcaacttcaggt
gcttcaatccctccggacaacttggcttctaagttgagtgaaactgggttgttatatgat
ggccaaagcatccatagtcctactaatgcggcacttgttcttgaaaatattaaacaagag
gttgagagtcttgatgctgattacttggaagagaagacatcatattccactaggaggagg
ttgtctgccgactttcctggtgtggatcctggttttgattctgtacgctattcattaaag
gcttgtaagacagagggtgacacattgggagatggtgcagacacaatctttactttgttt
gcatccctgcttgattcttctttgcaaggactgatgcctattgccgatctgatactaaga
gtcgagaatgcatgtcgaaatgtttcagagtctataaggtatggtttgaatgtaaggcat
cgtgttgttgaggacaaattgatgaggcagaaggctcaacttttgcttgatgaagcggca
acatggtctctcttgtggttcctttatgggaaagggaccgaagaactctctaaagatcaa
atattggtgtcgggaacctcacatgtggtggcttgtgagtttgttgcggaggatcataca
gctcaattatgccttcggatagtccagtggttagaaggtttagcttctaaagcacttgat
ttggaagcaaaggtgcgtggatctcatgtgggtagttatctccctaactgtggagtttgg
catcatactcagcggtacctgaagaaaggaactcttgacatgaatgttgttcatcatttg
gactttgatgccccaactcgtgaaaatgctaatctattgcctgatgacaagaaacaagat
gaatctcttctagaagatgtgtggactcttttaagggctggacggctagaagaggcttgt
ggactttgccggtctgctggacagccttggagagcttcttctatttacccatttggaggc
ttgaagcagtttccttctgttgaagttctggtcaagaatggtaaaaatagaactttgcaa
gctgttgaatttgaaagtggcattggtcatcagtggcatctttggaaatgggcttcatat
tgtgcatcagagaaaatagcagagcaaggagggaaatgtgaagcagctgtatatgcagcc
cagtgtagcaacctaaaacggatgcttccactctgcaatgactgggagtcagcatgctgg
gcaatggcaaagtcttggctagatgtgcaggtggacttggaaatcactcgttcactgcca
gggggagttgatcaacttagaacttttggagatgtaattgatggaagccctggacacgct
gacggttcttttgagccttctaatggacctgaaaattggccaattcaagttttgaatcaa
caacctcgacaactctcgtctcttctgcaaaaacttcattcaggggaaatgatccatgaa
tctgttactagacaatgcaaggagcaacagcgacaaattcagatgactttaatgcttggg
aacataccacgtgtactagaccttatatggtcatggatagcacctactgaagataatcag
aatgtatttaggccgtgtggagatcctcaaatgatacgatttggtgcacatctggtcctt
gtgcttcgatatttactagctgaggaaatgaaggacaccttcaaggacaagattctcagt
gttggtgataatattttgcacttgtatgccctatttctcttttcaaaggagcatgaagag
ttggtgggcatatatgcttctcagcttgcatgtcaccgttgcattgatctctttgtgcac
atgatggagcttaggctgcacagcagtgtacatgtcaaatacaagatattcctttctgct
atggaatatttaccattttcttctgtggatgattccaagggaaattttgaagacattact
gagagaattttggcaagatcccgagagatcaaggttggcaaatacgataacctgtcagat
gttgcagaacagcacagactgcagagtcttcaaaaagctaaagtcatccaatggctttgc
tttacaccaccatcaacaattacaaatgtcaaagatgtcagtaaaaagcttcttcttcga
gcactggttcatagcaacatactcttcagggagtttgctttgatttctatgtggagagtg
ccagcaatgcctataggtgcccacacagtgcttggtttcctcgctgaacccttaaaacag
tttgcagaagctcttgagacctctgaggattataatgtttttgaggatctgagggagttc
caagactggcgtgagtattactcttgtgatgcaacctaccgcaactggcttaaaattgaa
gtggagaatgcagaggttcctgtcactgaaatttcacttgaggaaaaggaaaggtccatt
tcagctgccaaggaaacactgaaggcatccctttcactgctacaaagaaaagagacacct
tggttggcttcaactggtcgtatgtatgagtcagctgaaccagttttccttgaacttcat
gcaacagcaatgctctgcctgccatctggagaatgtttgtgtccagatgctactgtttgt
actacacttacaagtgctctctactcttcagctggtgacgaggttgtcttaaatcgacaa
ctaatggtgaatgtttccatatcttcaagggacagttattgcattgatgttgttcttcgt
tgcttagcaattcctgatgatggacttgaaccacatgagctcaatgatggtggtattctt
ggcaccatcctggcttctggttttaaaggtgagcttcctcggtttcaagctggagttacc
atggaaatatcccgtttggatgcttggtattctgacaaagatggccccctagagtgcccg
gcaacctacatagtgaaaggactttgtcgtaggtgctgccttccagaagtcattcttcgt
tgtatgcaagtctctgtttctctaatgggatcgggagtcctgcctgactgtcatgatact
ttgatcgagctggttggcagtcctgaaactgactttcttcacttgtttagtcaacaacaa
ttacaggagtttttattgttcgagagggaatactcaatctgcaaaatggagattacagag
gaatga
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