Phaseolus vulgaris (common bean): 137818484
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Entry
137818484 CDS
T03093
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
137818484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137818484
Enzymes [BR:
pvu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
137818484
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
137818484
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
137818484
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
137818484
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
137818484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
AAA_33
Macro
zf-C2HE
HIT
Zeta_toxin
AAA_18
AAA_16
KTI12
AAA
ILVD_EDD_N
Motif
Other DBs
NCBI-GeneID:
137818484
NCBI-ProteinID:
XP_068478040
LinkDB
All DBs
Position
10:16655355..16661418
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AA seq
764 aa
AA seq
DB search
MDMMDEDETSAPREGKPVLVILVGAPGSGKSTFGEDVMRSSTRHWVRVCQDTIGNGKAGT
KAQCLSSATSALKDGKSVFIDRCNLNREQRSEFIKLDGGLQIDVHAVVLDLPAKLCISRS
VKRTGHEGNLQGGKAAAVVNRMLQHKELPKLSEGFNRITFCQNENDVKNAINTYSSLGPL
DSLSHGCFGQKNTDSKIQVGIMKFLKKAEVPLTATSTTRSTEDPTSQTLRKNNSYCKDKE
TLSSILDNANLESKEVEGQEVGSAGYHADQVCLDDISTLAFPSISTSDFQFNLEKAADII
IEKVVEFSNKFRNARLVLVDLSHKSKILSLVKARVVEKNMDTQRFFTHVGDITHLYSRGG
LRCNAIANAANWRLKPGGGGVNAAIFNAAGPELESATKEKVKSLSPGNAAVVPLPSSSPL
FTREGVTHVIHVLGPNMNPQRPNYLNNDYSKGCKILQDAYTSLFEGFASIVMNQPGIPVG
KSENLERKSLELPVRSDCSSRKYFTSDQKSKRGHDHGSEKSKKCKGNHDGLGLAFTNSKD
EKVDSEHTRTERSRSKAWGSWTQALHQIAMHPQQQKGDLLEISDDVVVLNDMYPKAQKHV
LVLARIGGLDCLADVQKEHLQLLNKMHDVGLKWAEKFLNENASLVFRLGYHSAPSMRQLH
LHVISQDFESTQLKNKKHWNSFNTAFFRDSVDVMDEISSDGKATLKDDDKLLSMELRCHR
CRSAHPNIPRLKSHISSCQSPFPAYLLQNGRLVNAPGEPRNSVP
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatggacgaggatgaaacttctgcacccagagaggggaagcccgttttggtg
atcctggttggagcacctggaagtggcaaatccaccttcggtgaagatgtaatgcgttcc
tctactcgccactgggttcgcgtttgccaggacactattggaaatggtaaagcaggaact
aaagctcaatgcctaagcagtgcaactagtgcgttgaaggatgggaagagtgtatttatt
gataggtgcaatcttaacagagaacagcggtcagaatttataaagcttgatggtggactc
caaatagatgtccatgcagttgtacttgatcttcctgctaagctttgtatttctcgatca
gtcaaacgaactgggcatgaaggaaatttacagggtggaaaagctgctgcagttgtgaat
agaatgcttcaacataaagaacttcccaaattaagtgaaggctttaaccggataacattt
tgtcagaatgagaatgatgtaaaaaatgctattaatacatacagctcacttgggccgctg
gatagtctttcacatggctgctttggtcagaagaatacagattccaaaattcaagttggt
ataatgaagttcctaaaaaaagcagaggtcccacttactgctacatctacaacgagaagc
actgaagaccctacttcccagactctaaggaaaaataattcctactgcaaagataaggaa
acactttcctcaattttagataatgccaacttagagtcaaaggaagtagaaggccaagaa
gttggctctgctggttaccatgccgatcaagtttgtctggatgatatttccactttggca
tttccctctatttcaacatctgatttccaattcaaccttgagaaggcagctgatattatt
atcgagaaggttgtggagttctcaaataagtttaggaatgccagacttgttcttgttgac
ttgtctcacaagtcaaagattctttccttagttaaagccagagtcgtggaaaaaaacatg
gacacccaaaggttttttacccatgttggggacattactcatctttattccaggggaggt
ttgcgatgtaatgccattgctaatgctgccaactggaggttgaaacctggaggtggaggt
gttaatgcagcaatttttaatgctgcaggtccagaactggagtctgcaacaaaagaaaaa
gtaaaatctctttcgcctgggaatgctgctgttgtccctctaccttcatcttctcctttg
ttcaccagagagggtgtaacccatgtaatacatgttcttggacctaatatgaacccacaa
agaccaaattatctaaataatgattatagtaaaggctgcaaaattctccaagatgcttat
acttcactttttgaaggttttgcatctattgtgatgaaccagccagggataccagtggga
aaaagtgaaaaccttgaaaggaagtctttggagttgccggttcggtctgattgttcttcc
agaaaatattttactagtgatcaaaagagtaagagaggtcatgatcatggatcagagaaa
agcaagaaatgcaagggaaatcatgatggcttaggattggcctttactaattctaaggat
gaaaaggtagattcagagcatacaagaactgagaggagcagaagtaaggcttggggatca
tggactcaagctcttcaccaaatagctatgcatcctcaacagcaaaagggtgacttactt
gaaatttccgatgatgttgttgtattgaatgatatgtatccaaaggcacagaagcatgtt
ctggtgttggcacgaattgggggtcttgactgcctcgctgatgtccaaaaggagcacctt
cagttattgaacaagatgcatgatgtgggtttaaagtgggcagagaagttcttgaacgag
aatgcttctctggtatttcgacttggatatcactcggcaccatcaatgcgacaactacat
ttacatgttattagccaggactttgaatcaacacaattaaagaataagaagcactggaac
tcgtttaacactgctttctttcgtgactcggttgatgtaatggatgagatctctagtgat
gggaaggcaacattgaaagatgatgacaagctactctccatggagttgaggtgccacaga
tgtagaagtgcccatccaaacataccccggttaaaatctcatatcagcagctgtcaatcc
ccctttcctgcttacctacttcagaatggacgtttagtgaatgctccgggggaacctcgc
aacagtgtcccgtag
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