Phaseolus vulgaris (common bean): 137819761
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Entry
137819761 CDS
T03093
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137819761
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
137819761
5.6.2.5 RNA 5'-3' helicase
137819761
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
137819761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
137819761
NCBI-ProteinID:
XP_068479841
LinkDB
All DBs
Position
10:41215400..41223328
Genome browser
AA seq
1400 aa
AA seq
DB search
MGSRGRPLFDLNEPPTEDNDGRDGIVCIQPQKTHPSTNPHASDLFPTSTAAQGIINNHAF
SHASSVSGFQPFVRPKSTGVPESDAELKRVGDQDTKVSSKSSKDEDVKVMDSRILSSTNA
QSTEREEGEWSDEDVFANANGGNNPKANGGNNPNANGGNNANANVGNNLPQRGQASEELA
TSGMVDVSLLVASDSKPRNIKSSDSINDERGSHASIGLESNSSEQKNNSIPNSESNIKSE
TSSDALEEPTLVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLE
DVKQAGPIKTSTPRRQTFSSSSVVSRTIKEVRTIPAQVERVGIAKDQKLTDTSSGEGGNH
AEAQEPKSSDCNGDTSGPLVRSRRLNSEAEPSAEANLPPIPRQGSWKQLTDSRQQKNALH
SNRKLGLSSQSSNDVKLGNKKHLSIKKQAPISSQSQDTSVERLIREVTSEKFWHHPEETE
LQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERG
WYDVKVLPVHEFKWSFKEGDVAILSSPRPGSAVRSKQNSSSVAQDDGESEVTGRVVGTVR
RHIPIDTRDPPGAILHYYVGDSYDPSRVDDDHIIRKLLSGSIWYLTVLGSLATTQREYVA
LHAFRRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWA
ATHTAAGTSSGSTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVA
PESYKQVNEINSDHIPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLAR
VLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNR
EAQLTQQLHCLHRELNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQNLAAVVENRDKVL
VEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDM
VVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAG
CPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVVKLPDEPYYKDPLLKPYIFYDIRHG
RESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGVGKITVGIITPYKLQLKCLQREFEE
VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWV
MGNANALVQSEDWAALINDAKSRKCYMDMDSLPKDFLVSKGPVYTSLPKPSSNMRGMRSA
GPRYRSMDMHMESRSGAPSEDDENMGAPIGSRNGNHRQSRFSMENSFDDFDHGGDKSRDS
WQYGIQKKQNSSGPMGKRDV
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcgaggaaggccattatttgatctcaatgaaccgcctacagaggataatgac
ggtagagatggtattgtctgcatccagccccaaaagacacacccatcgacaaatccccat
gcttctgatttatttccaacatcaactgctgcccaaggaataataaataatcatgctttt
tcacatgcctcatctgtctctggatttcaaccttttgttcggcctaaatccactggtgtg
cctgaatcagatgctgaattgaagagagtaggagatcaggacacaaaggtttcctccaag
tcaagtaaagatgaagatgtgaaagttatggattcacggatactaagttcaacaaatgcc
caatctactgagagggaagaaggggaatggtctgatgaggacgtttttgctaatgcaaat
ggaggtaataatcctaaagcaaatggaggtaataatcctaatgcaaatgggggtaataat
gctaatgcaaatgtaggtaataatttgccacaacgaggtcaagcttcagaagagctagca
acatctggaatggtggatgtgagtcttctggttgcgtctgacagtaaacctagaaatatt
aagagttctgatagtataaatgatgaaaggggtagtcatgcttctataggtctagaatca
aattcgagtgagcagaaaaacaatagtattccaaattcagaaagcaatataaaaagtgaa
acctctagtgatgcactggaggaacccactttagttcccaagcaaaaagaagtgaaaggt
attgaagcaagtcatgcacttaggtgtgcaaataatccaggtaagaggaagattgaccaa
cgtaaagaggaaatgttgggaaagaaacgaaatagacagacaatgtttcttaacttagaa
gatgttaagcaagcaggtcctattaaaacctcaacccctagaaggcaaactttctcatca
tcatctgttgttagtcgaacaataaaggaagtccgcactattcccgcacaagttgagcgt
gttggaatagctaaggatcagaagctcactgatacatcttctggtgaaggtggcaaccat
gctgaagcacaagaacctaaatcttctgattgtaatggcgatacttctggaccacttgtt
agatccaggaggttaaacagtgaggcagaaccttctgcagaggccaatttgccaccaatt
ccaagacagggttcatggaaacaattgacagattcaaggcagcagaagaacgcactccat
tctaataggaagttgggactgagtagtcaaagttctaatgatgttaaattaggaaacaag
aaacatctttctatcaagaagcaggctcctatcagcagccagtcccaggacacatctgtt
gagcgccttatacgggaggtgaccagtgaaaagttttggcatcacccagaggagactgag
cttcagtgtgttcctggacggtttgaatcagtggaagagtatgttagagtatttgagcct
ttgctttttgaggaatgccgtgctcaactttatagtacttgggaagaatcaactgaaaca
gtgtcaagggatactcatattatggtgcgtgtgaaggcgaatgagtcaagggaaagagga
tggtatgatgttaaagttcttccagtacatgagttcaaatggtcatttaaggagggtgat
gttgcaattctttcatcccccaggcctggatcagcagttagatccaagcagaacagttca
tctgtagctcaggatgacggggaatcagaagtcactggacgagtggttggtacagttagg
cgtcacatacctattgatacccgtgatcctcctggtgcaattcttcattactatgttgga
gactcttatgatcccagcagggttgatgatgatcatatcataagaaagcttctaagtgga
agcatctggtacctcactgttctcggttctcttgctaccacacaaagggagtatgttgcc
ctacatgcatttcgtcgattaaatttgcagatgcaaactgcaatccttcagcctagtcct
gaacacttccctaaatatgagcaacagaccccagccatgcctgaatgcttcactcagaac
tttgttgagtatctgcgtaggaccttcaatgaaccccagttagcagcaatccaatgggca
gctacgcatacagctgctggcacaagtagtggatcaacaaaaaggcaagaaccttggcca
tttaccctcgttcaaggacctccaggaacaggaaaaacacatacagtgtggggaatgttg
aatgtcattcaccttgttcagtatcagcactactacacctctttgctaaagcatgtagcc
cctgagagctacaagcaagtcaatgagattaattctgatcatatccccactggatctatt
gatgaagttcttcaaaacatggaccagaatctcttgcgaaccttacctaaactggtccca
aaacctagaatgttagtctgtgctccgtctaatgctgccactgatgagcttcttgcccgt
gttcttgatcgtggatttattgatggggagatgaaagtttatcgacctgatgtagctcga
gttggggttgattctcagacacgtgctgcccaagcagtttctgtcgagcgcagaactgaa
cagcttttaatcaagagtcgagaagaaattatgggatggatgcaccagttaaagaatcgc
gaggcgcagttgactcagcagttgcattgtcttcatagagaacttaatgcagctgctgct
gctgttcgttcccaaggatctgttggtgttgatcctgaccttctcatggcccgagatcag
aatcgagatgctttgctgcagaaccttgctgcagttgttgaaaatcgggacaaggttctg
gttgagatgtctcgcctagcccttcttgaaagtaggtttcgacctggtagtggatttaat
ttggaagaagcccgtgctagtttggaggccagttttgcaaatgaagcagagattgttttc
actacagtttctagcagtggccgtaagttgttttctcgcctttcccatggttttgatatg
gtggtcattgatgaggcagcccaagccagtgaggtggcaattctgcctcccctctctctt
ggtgcagctcgttgtgtccttgttggagatcctcaacagcttcccgctacagttataagc
aaggctgctggaacattgatgtacagtaggagtcttttcgaaaggttccaacaagcaggt
tgcccgacaatgttgttgtctgtgcagtacagaatgcaccctcatattcgggatttccct
tctaggtacttctatcaggggcgccttactgatagtgaaagtgtcgttaaactgcctgac
gagccatactacaaggaccctttacttaaaccttatatattctatgatatcagacatggg
cgtgaatctcacagaggtggatcagtctcttatcaaaacatacatgaagcacaattttgt
ctcagattgtatgagcatgttcagaaaacggtcaagtctttgggtgtaggaaaaattact
gttggcataattactccttataagctgcagttgaaatgcctccagcgtgagtttgaagaa
gtgttaaattcagaagaagggaaagatctatatatcaataccgtagatgccttccaaggt
caagaacgggatgtcattataatgtcttgtgtgcgtgcatctagtcatggtgttggcttt
gttgcagatattcggcggatgaatgttgcccttacacgtgcaagaagggccctctgggtc
atgggaaatgcgaatgctctggtgcaatctgaagattgggctgcattgattaatgatgca
aaatctcgaaaatgctatatggacatggactctcttcctaaagacttcctggtgtccaag
ggacctgtttacacatcattgcccaagccttcttcaaatatgaggggcatgagatcggct
ggaccaagatatagatcaatggatatgcatatggagtccaggtcgggagcaccatctgaa
gatgacgagaatatgggtgctccaattggctctagaaacgggaaccatcgccaatcacgg
ttttcaatggagaattccttcgatgattttgatcacgggggtgacaaatccagagattct
tggcagtatggtatacagaagaaacagaactcatctggacccatgggaaagagagacgta
taa
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