Phaseolus vulgaris (common bean): 137820119
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Entry
137820119 CDS
T03093
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03410
Base excision repair
pvu03420
Nucleotide excision repair
pvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137820119
03410 Base excision repair
137820119
03420 Nucleotide excision repair
137820119
03430 Mismatch repair
137820119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
137820119
03036 Chromosome and associated proteins [BR:
pvu03036
]
137820119
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137820119
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137820119
DNA Replication Termination Factors
ELG1-RFC complex
137820119
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
137820119
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137820119
Check point factors
HRAD17(Rad24)-RFC complex
137820119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DUF4047
Motif
Other DBs
NCBI-GeneID:
137820119
NCBI-ProteinID:
XP_068480052
LinkDB
All DBs
Position
9:complement(18109550..18114311)
Genome browser
AA seq
686 aa
AA seq
DB search
MVSGEHNLPSPTLKQYNVNVSDQSMSKNHISPTPHRFRSRRRKTTSAWPFSSLSLREYGI
HNTNSPYYKGLTDQSLAIVDAIPSSCTQPQPHPLPHTPPTDLLSSPYYKGLTDYSLVIGP
LTSHHHPSFSSTPSPYYAGLLTHYTLLLHAPSLDQPPFTHFQPPIQTTQGITPPPNLKTD
STLKDLMVHADQVDFLIQETNQFGNYALEELGQRENDVDVDVDVEMVIEEKAWESVFEHK
FEAVLEETMLDVRLMSDDVIEETPLGEKGSERREDAVEMDVWKEEEVKVHEEISRVFVSS
EGDVYDYTWAAKHQPMTLADFICNKDKAHQLKTMVKDGCGCSHFIFEGPPSVGKRSMIRA
MLGEVFGADRVQVTEEHKNFILKGEMVDSVQVRVKKSLHHVEVNLSETKGYEKHVIVDLF
KETYGQVIDNSQPCFPDNCKAIVLYEAEKLSIESLLYIKWLLEKYEGCNKVFFCCSDESK
LQPVKPLCITIRLSSPSTQELAKILENIAKEEGIQLSRHLLDTIVLSSRNNLRQAIRSLE
ATCRNRDVLKDEDVILTGWEEDILDIAKNIIQEQSPRQLYAIRRKLRSLMSHDVPPDYIY
KSLVPELTTLVHHSLRPGIAKLDREFMRPSETTKQHFCHAQNKQSESDDKNNDSTKRNTL
TYLKLEEFIAKVMSWYKNWSEKDNKQ
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtggcgaacacaacctgccaagtccaaccttgaaacagtacaacgttaacgtc
tccgatcagagcatgtcgaagaaccacatctcacccacaccacataggtttcggtccaga
aggaggaaaaccacttctgcttggcccttctcatcgctcagcctccgcgaatacggcatc
cacaacactaacagtccctactacaagggtctcactgatcagtcccttgccattgtagac
gccataccctcctcctgcactcaacctcaacctcatcctcttcctcatacccctcccacc
gacctcctttccagtccttactataaagggcttacagactattcccttgttattggcccc
ttgacctctcaccaccatccctccttctcttccacccccagtccttactatgctggtctt
ctcactcactacacccttctacttcatgcaccctcacttgatcaacctcctttcactcac
ttccaacctcctatccaaactactcaagggataacgccccctccaaacctcaagaccgac
tctactttgaaggacttgatggtccacgctgaccaagttgactttcttattcaagaaacc
aaccaatttggtaattatgcattggaagaacttggccagagagagaatgatgttgatgtt
gatgttgatgttgagatggtgattgaagagaaggcatgggagagtgtattcgagcataag
tttgaggctgtgttagaagaaacaatgttggatgtgaggttgatgagtgatgatgttatt
gaagagacaccattgggggagaaaggttcagaaagaagggaggatgcagtggagatggat
gtgtggaaggaagaggaagtgaaagtgcatgaagagatatcaagagtttttgtttcatca
gagggagatgtgtacgactatacatgggcagccaaacaccaacccatgactttggcagac
ttcatctgcaacaaagataaagcacatcaactcaaaacaatggtaaaagatggttgtggg
tgcagtcactttatatttgaaggaccacccagtgtgggaaagagatccatgataagggct
atgcttggagaggtatttggagccgacagggtccaggtcacagaagaacataaaaacttc
attttgaagggagaaatggttgatagtgtgcaagtgcgcgtgaagaaatcactccatcat
gttgaggtgaatctgtcagagacaaagggatacgaaaaacatgttattgttgatttattc
aaggaaacatatggtcaggtgatagataactcgcagccttgtttcccagacaattgcaaa
gcaatcgttttgtatgaggcggagaagctatccatagaatcgttgttgtatataaagtgg
ctgctagagaagtatgaaggctgtaataaggttttcttctgttgctctgatgaatccaag
ctccaacctgtgaagccactttgtatcactatccgtctttcatcgccatcaacccaagag
ctagctaagattttggaaaacattgcaaaagaagaaggaattcagttatcacgccactta
ctcgataccatagttttgagctccagaaacaatctacgccaagccattcgttcgttagag
gccacttgccgaaacagggatgttctgaaagacgaggatgtgattctaacagggtgggaa
gaagatattttggatattgccaagaacataatccaagagcaaagtccacgacaactgtac
gccattcgtagaaagctgcgaagtcttatgagccatgacgttcctcctgactatatttac
aagtctttggtaccagagttaaccactcttgttcatcactccctacgcccagggattgcc
aaactcgacagggagttcatgagacccagtgaaactacgaagcagcacttctgtcatgct
caaaacaaacaatcggaatctgacgacaagaacaatgattcaacaaaaaggaatacctta
acttacttaaaattggaagagtttatagcgaaagtgatgagctggtacaagaattggtct
gaaaaagacaataagcagtag
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