Phaseolus vulgaris (common bean): 137820135
Help
Entry
137820135 CDS
T03093
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03440
Homologous recombination
pvu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137820135
03460 Fanconi anemia pathway
137820135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
137820135
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137820135
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
137820135
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Topoisomerases
137820135
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
137820135
FA (Fanconi anemia) pathway
137820135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
137820135
NCBI-ProteinID:
XP_068480077
LinkDB
All DBs
Position
9:22947183..22973124
Genome browser
AA seq
923 aa
AA seq
DB search
MNVLNVAEKPSVAKSVSTILSRNQGIRTREGRSRYNKIFEFNYTIRGQPCHMLFTSVTGH
LMELEFDERYRKWHACNPADLFRAPVHKFVPEDKKDIKRTLEEEARRCQWLVLWLDCDRE
GENIAFEVVDVCTAVNPHLTIKRARFSALIDREIHHAVQNLEEPKKCLADAVDARQEIDL
RIGASFTRFQTMLMKDAFVIDTATDGRNLILSYGPCQFPTLGFVVERYWEIQAHEPEEFW
SINCAHESEGRIAKFGWMRGHLFDYTCAVIIYEMCVEEPTATVTNVRHQEKPKYPPHPLN
TIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSSRTDLHTIVQEQQGHPE
WGVYAQRLLDPGTGLWRNPRGGGHDDKAHPPIHPTKFSTGESGWSQDHRKLYELVVRHFL
ACVSKPAIGAETTVEIDIAGELFSACGRVILEKNYLDVYHYESWGGSLIPTYTIGQQFIP
TTLILDSGVTRPPPLLSEADLLSYMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPT
NLGEALVMGYDDMGYKLWKPYLRAVMERDMKFVSEGNKSKADVLATSLQLMEACFLDARL
NKVKLLEAMAIFFERSGRSGNDELHAMGEVVRQCGLCQESDMVLRKNRDGNFMVGCLGYP
QCRNAVWLPGSLSEAVVTTNTCNICSPGPVYLIQFKFRQLEIPPNYSVNHLGCIGGCDEI
LSQLTEICGRGSRMPARPRGPTAPTSNAHHTNPRQPTAPTSNGLHTNPRQRRCMNCQETG
HSSNDCPLRSGNVRHRGASEHNGEASVSCSSCGTPCVLRTANTATNRGRKFYSCQSQECN
FFVWEDSLDDGTGGRSATRSNSIPSSNPRRTGGRGSRGRGGQTGAHTAATTFVSATGDPI
SGRRCYRCGDPSHFANVCPNRGV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttctgaacgtggcggagaagccctctgtggcgaagtccgtctccaccatcctc
tcccggaaccagggcataagaacgagggagggtcgttcccgctacaacaagatcttcgag
ttcaactacaccattcgcggccaaccctgccacatgctcttcacctctgtcaccggccac
cttatggagctcgagttcgacgagcgttaccgcaagtggcacgcgtgtaaccccgccgat
ctcttccgcgcccctgtccacaaattcgtccccgaggacaaaaaagatatcaagaggacg
ctggaggaggaagcgaggaggtgccagtggcttgttttgtggctcgattgcgatagagag
ggtgagaacattgcgtttgaagtggttgacgtctgtactgcggtgaatcctcatcttact
ataaaacgggctcggttttctgcattgattgacagagagatccatcatgctgttcagaat
cttgaggagccgaagaaatgtcttgctgatgctgtcgatgccaggcaggaaatagatctc
cgtataggtgcttctttcacgaggttccagaccatgttgatgaaagatgcttttgtcatt
gacactgctacagatggcagaaaccttatcctaagttacggcccttgccagtttcctaca
cttggatttgtcgtggaacggtattgggagatacaagcacatgagccagaagagttttgg
tctatcaactgcgctcatgaatcagagggacgcattgctaagttcggctggatgcggggc
cacttgtttgattatacatgtgcagttataatatatgagatgtgtgttgaggagccaaca
gcaacagtgacaaacgtaagacatcaggaaaagccaaagtatcctccacatcctttgaat
accattgagcttgaaaagcgtgcttcaagatacttcaggatgagttctgagcacacaatg
aaggtggcagaagaactttaccaagctggtttcatcagttatccccgtacagagactgat
aacttttcttcaaggactgatttgcatacaattgtgcaagaacaacaagggcatcctgag
tggggagtatatgcacaacgattgttggaccctgggacagggctttggagaaaccctaga
ggtggtggacacgatgacaaggctcatccacccattcaccctacaaaattttctactgga
gaatctggatggagccaagatcaccgtaaactgtacgagctggttgttcgccactttttg
gcatgtgtctcaaagcctgctataggagctgaaactactgttgaaattgatattgccggt
gaactattttctgcttgtgggagggtgattctagagaaaaactacttggatgtttatcac
tacgaatcttggggtggatcactgattccaacatatactattggtcaacagttcattcca
acaacattaatccttgattccggagtaacccgaccaccaccacttttaagtgaagctgat
ttgctgagttatatggacaaggagggtattggtacagatgctacgatgcatgatcacatc
aagaagctacttgatcgattttatgcaactaaggatgctaacactcgtttcacaccaact
aatcttggtgaggcacttgttatgggatatgatgacatggggtataaactctggaaacct
tatcttagagcagttatggaacgtgacatgaaatttgttagtgaaggaaataaaagcaaa
gctgatgttttggcaactagcttgcagctgatggaagcttgtttcctagatgcgagattg
aataaagtgaaacttttagaagccatggcaatattttttgaaagatccggtagatctggc
aatgacgagctacatgcaatgggagaagttgttcgacaatgtggactttgtcaagaatca
gacatggtgctaaggaaaaatcgagatggcaattttatggttggatgtttgggctaccct
cagtgtaggaatgctgtgtggctccctggatcactatcagaagcagttgtgaccaccaat
acgtgcaatatctgttctcctggtcctgtttacttaattcagttcaagtttaggcagctg
gaaattccgccaaactacagtgtcaaccatttgggttgcattggtggctgtgacgagatt
ctttcacagttgacagaaatatgtggcaggggatctcgcatgccagcaagacctcgagga
ccaactgcaccaacgagcaatgcccatcatactaacccacgacaaccaactgcaccaacg
agcaatggccttcatactaacccacgacaaagacgttgtatgaactgtcaagaaacagga
cattcttctaatgattgtcctttacgctctgggaatgtccgacatcgtggagcaagtgaa
cataacggggaagcttctgtttcatgcagttcgtgtggaacaccatgtgttttgagaact
gcaaatacagcaactaacaggggaaggaagttctattcatgtcaatcacaggaatgcaac
ttctttgtatgggaggatagcctcgatgatggaactggaggcagaagtgccacacgttca
aatagtattccatcctccaatcctaggcgaacaggtggacgcggatctcgtggtagaggt
ggccagacaggagctcatactgctgccacaacatttgtttcggcaacaggagatcctatt
tctggtagaaggtgctataggtgtggtgatccatctcactttgcaaatgtctgccccaat
cgtggtgtctga
DBGET
integrated database retrieval system
