Phaseolus vulgaris (common bean): 137820141
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Entry
137820141 CDS
T03093
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvu01002
]
137820141
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvu04121
]
137820141
Enzymes [BR:
pvu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
137820141
Peptidases and inhibitors [BR:
pvu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
137820141
Ubiquitin system [BR:
pvu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
137820141
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
137820141
NCBI-ProteinID:
XP_068480093
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All DBs
Position
9:21578276..21587006
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AA seq
1125 aa
AA seq
DB search
MRVTGDLGFSSLILLVLCLVLPVIGLIIIRRWQVSETRKREIRRLLVLAAEETARAEKEA
SFAYGTAVSATPSNQCALCYFPATARCAQCKSVRYCSFECQTVHWRQGHKLECGPPSTIH
RSYDVTSDLGSKVVEQGYSGISGEKSECENTDYKSSFEKPPISDICFSPKVLSGNDENIR
FQSLAEGHITDSNSDLSSNSFSGFSASTGSSDSSDDSSVCESVISNEHDRSDGHIFVDST
LDIPDNTNDNSEGVTMSSSPKFASLVDSIDGFSTMHKSNHIGPGFSKDESKFASNDNSGS
SVYKGNTNDPSTVIPGFWDKALDGIKDDSKNDTHPSYSDKSAGKRIVSESSFHFSFSAIP
PSHVRDTKMKGSVSDNAFPNCIGSENDNMNSSKGRNFSFPNSKVSNVRSYVTPSGSESDH
LESKDSSRPPSSSFSLQSSSVGKDSVCADALSIHNLQSTVTEVSNHVVENHCSTLKSTEI
RCLKLDHADSNLASETKEHSHTSTKHGNNEVEFGTCAVTSSRVASCSANSKSDIKTSVLK
VVDQFRGSNMSKNFPLSVGSDIGERHNDKVFFPYELFVKLYNSNKVELCPFGFINCGNSC
YANAVLQCLAFTPPLTAYLLQGLHSKSCANKKWCFTCEFERLILKSKDTKSSVSPVSIIS
HLQNIGSQLTNGREEDAHEFLRHVIDTMQSVCLMEAGVNALGSLVEDTTLMGLTFGGYLR
SKIKCMKCGGKSERQERMMDLTVEIEGDITTLVDALQRFTSTETLDGENKYHCVRCKSYE
KAKKKLTVSEAPNVLTVALKRFQHGKFGKLNKPIQFPEILNLAPFMSGTSDKSPVYRLYG
VVVHLDTMNAAFSGHYVSYVKNIQNRWFKVDDSVVTAVELERVLTKGAYMLLYARCSPRA
PRLIRNRILSSDSKSKVSGKTLATKARYISTNSGVAENVDSSISPDGSPALESFYSKFHH
LKKILEEDSSSDSSSLISSNSDEGSCSTDSTCDSASTDDFTDYLFGDSGNGWSSAWKNSD
SDTSWSSSSSPLNSRHSPLSDMDRYDSVSPDAAGLCISTGSSVEKDRPVYNSCLHSNTTS
QHRGLDSGRISSKISSRESDSFVKVGSNLWNDTECGVLCRKYRRN
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcaccggggatctagggttttcgagcctgatccttctggtgctttgtctagtg
ctgccggtgatcggcctcataattatccgtagatggcaggtttcggagactaggaagagg
gagattaggagacttttggttttggccgcagaggaaactgccagggccgagaaagaagca
tcatttgcgtatggcacggcggtttctgccactccaagcaatcaatgtgccttgtgctat
tttcccgccactgcgcgctgcgctcagtgcaaatccgttcgctactgttcctttgagtgc
caaactgttcattggcggcaaggtcacaagttagaatgcggtcctcccagcacaatccac
cgaagttatgatgtaacaagtgatcttggcagcaaggtggtagaacaaggctactctgga
atctctggtgagaagtcagaatgtgaaaacacagactataaatcatcctttgaaaagcct
ccaatttctgatatctgcttttctccaaaagttttatctgggaatgatgagaatatcaga
tttcagtcccttgcagaaggacatataacagattccaattcggacttgtccagtaactct
ttttctggattctcagcttccacgggttccagtgattcatctgatgattcctctgtctgt
gagagtgtcatttcaaatgagcatgacagatcagatggacatatttttgttgattccacc
cttgacattcctgacaacactaatgacaatagcgagggtgtaaccatgtcttcttcaccg
aagtttgctagtttggttgattcaatagatggtttttctacaatgcataaatcaaatcat
attggacctggttttagtaaagacgagagtaagtttgcatcaaatgacaattcgggttca
agtgtgtataaggggaacacaaatgacccttctacagtgattcctggattctgggataaa
gcacttgatgggattaaagatgattctaagaatgacactcatccatcctattctgataaa
tcagcgggtaaaaggattgtttctgaatcttcatttcacttttcattcagtgccattcct
ccttcacatgtacgagataccaagatgaagggttctgtatctgataatgcttttccaaat
tgtattgggtctgagaatgacaacatgaattcttcaaaggggaggaatttctctttcccc
aacagcaaagtttctaatgtgaggagttatgttactccaagtggttctgaatctgatcat
ttggaatctaaagacagctccaggccaccttcatcatctttctcccttcaatcctccagt
gttggcaaagattcagtttgtgcagatgctttgagcatccataacttgcaatcgactgtc
actgaggtatcaaatcatgttgtggaaaaccattgcagcaccttgaagtctactgagatt
agatgcctgaagcttgaccatgctgattctaatttagcttctgaaactaaagagcattct
catactagtacaaaacatgggaataatgaggttgaatttggaacttgtgctgtcacttcc
tctcgtgttgctagctgttctgcaaattctaaaagtgacataaaaacttctgttttgaaa
gttgttgatcagtttagaggatcaaatatgtcaaagaactttccattatctgttggtagt
gatattggtgaaagacacaatgacaaggtttttttcccgtatgaattgtttgtcaagctt
tataactcgaacaaggtggagttatgcccatttggatttataaattgcggaaacagttgt
tatgctaatgctgtacttcagtgcttagcatttacaccgccactgactgcttatttgctt
caaggattacattctaaatcatgtgcaaataaaaaatggtgtttcacctgcgaatttgaa
agattgattttgaagtcaaaggatacaaaatcttcagtatctcctgtgagcataatctct
catttacagaatattgggagtcagcttactaatggaagagaagaagatgcacatgaattt
cttaggcatgttattgacacaatgcaatctgtttgccttatggaagctggggttaatgca
ttgggctccttggtagaggacactactttaatgggtctaacatttggaggttaccttcga
tcaaagataaaatgcatgaaatgtggagggaagtctgagcgtcaagaaaggatgatggat
ctgactgttgagatagaaggggatataacaaccctggtggatgcccttcaacggtttaca
agcactgagactctggatggggaaaacaagtaccactgtgtcagatgcaaatcttacgag
aaggccaagaagaagctgacagtttcagaggcacccaatgttcttactgttgcattaaag
agatttcagcatgggaaatttgggaagctcaacaagcctattcaatttcctgaaatactt
aacttggcacctttcatgagtgggactagtgataaatcacccgtatacagattgtatggg
gtagttgttcacttagataccatgaatgctgccttttcgggtcattatgtgtcctatgtg
aagaatatccagaacaggtggttcaaggttgatgacagtgtggtgacggctgttgaattg
gagagagtcttgacaaaaggagcatatatgcttttatatgctaggtgctcgccaagggct
ccaagattaattaggaacagaatactatcctcggattcaaaaagtaaagttagcggaaag
actcttgcaacgaaagcaagatatatatctacgaattctggtgttgctgaaaatgtcgat
agttccatctctccagatggttcacctgccttggagtctttctattcaaagtttcaccac
ctgaaaaagattttagaggaagactcgtcgagtgatagttcatccctcattagcagcaat
tctgatgaaggttcttgcagtacagatagtacctgtgattcagccagtacagatgacttc
actgattatctatttggtgattcgggaaatgggtggagcagtgcgtggaagaattcagat
tctgacacatcctggtcatcctcatcttcccccttaaactctcgacattcccccctctct
gatatggaccgatacgattctgtttctcctgatgcagctggtttgtgcatttccacaggt
tcaagtgtggagaaagaccgtcctgtatacaattcttgtttgcattctaacacaacttca
cagcatagagggttagatagtggtaggattagtagcaagattagtagtagagagagtgac
tcttttgtgaaagtaggatctaacctttggaacgatacagagtgtggtgtattatgtaga
aagtatagaaggaattaa
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