Phaseolus vulgaris (common bean): 137820381
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Entry
137820381 CDS
T03093
Name
(RefSeq) endoribonuclease Dicer homolog 3a isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvu03036
]
137820381
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
137820381
microRNA pathway
RISC loading complex
137820381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
DEAD
ResIII
Helicase_C
PAZ
SWI2_SNF2
dsrm
DND1_DSRM
AAA_22
Motif
Other DBs
NCBI-GeneID:
137820381
NCBI-ProteinID:
XP_068480547
LinkDB
All DBs
Position
9:13693723..13712270
Genome browser
AA seq
1697 aa
AA seq
DB search
MNLNNDSPGHNQTQSKKRKQLDADNSPYLELSNSNMNPRRYQVEVFQVAWRRNTIAVLDT
GSGKTLIAVMLMKEVGQTIKTLAVKKLIVFLAPTVHLVNQQFNNIKYLTDFQVEEYYGAK
GVDTWTLKTWEKEISSNDVLVMTPQILLDALRKAFLRMEMICLIVIDECHRATGNHPYTK
IMKEFYHQANEKPKIFGMTASPVGKKGVSSSTDCEDQISELESILDAKRYTIEDRTEMDG
YILSAQESCRYYDQARFSALSLKPKIEALWFKFDALLSENKSNYVDVENKFKTLSQRMSN
ELGKILHCLEDLGILCAYEAVKICHENFSKTEGMCEIYRTCYLQCITFVEEVIKLIEESL
HLADKNILGVDFDYSKAEDMGYISPKLLELIKIFQSLGYDTMIYYINSFPLKQYVIWQIG
NVFLSVYRESSQVVCLIFVDRIITAKVIEGFAKKVPQISHFSVSYLTGNNTSVDAVAPKR
QKEILDSFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRSRQANSQF
VVMLERGNLKQRNQLFDIIRSERSMTDASMNKDHESSLRVCTMGKTEAYYVESTGASVTL
DSSVNLIHRYCGTLPRDQYSSAKPSYVFLPVEGGYQCKLTLPSNSALQTIIGPSGKDIRL
ARHLACFEACKKLHQMGALNEHLVPLIENHSEDDHIVKNKESSSGAGTTKRKELHGTANI
RALNGAWGDKLDDAARFFAYKLEFACSIVSEIYSGFVLLIESKLDDDVGNIDSDLYLVSK
TVKASVSPCGQVDLDAKQMMKAKCFHELFFNGLFGRLVFRSKSAGGGTEFLLQKDTKSLW
REKHLYLLLPLEKLNGICGGAFQINWHGISSCASAIEFLRRKFSLGTGDCDDNGIITSPQ
DTSSMEIEYVGTNKIHFANCVVDADNIKDTLVLAIHTGKIYCIIDIDSNLSAESPFCEKS
KDHVTFSDYFSKRYGITLRHPRQSLLLLKQSHNPHNLLFNFHEEDGRDKSSQIGSTTSKV
PAHVHVPPELLFVLDFQRNVLRSLYLLPSLMYRIESLMLSSQLREEIDGQTSKSNINSSL
ILEALTTLRCSESFSMERLELLGDSVLKYVVSCHLFLKYPKKHEGQLSTRRSLAVCNSTL
HKLAIDRKLQGYIRDSAFEPRRWVAPGQRSLHPVCCDCGLDTLEVPLDVKFHTEDPKVVV
GKFCDRGHRWMCSKTIADCVEALIGAYYVGGGLFASLNVMKWLGIGTELELSLVDEAITA
ASLHSCVLKESEIECLEKKIGYEFSVKGLLLEAITHLSEKELGIGCCYERLEFLGDSVLD
LLITWHLYQSHTDIDPGVLTDLRSASVNNDNFAQVAVRHNLHQHLLHGSGLLLSQISEYA
KAISESDPRSHPSIRAPKALGDLVESIVGALLIDTKLSLDQVWEVFCPLLSPIVTPEKLE
LPPYRELNELCDSLGYFVKVNENCEKKGSMVHVEVSVQLLNDLLVREGKGVNKKTAKGEA
SFHLLKDLEKRGISYCNFMSKGKRDNSVHMTDSPHLKRDSSTCFTLIEEHSSEPVIKRNR
LDGTNPTESILPLKDSSNDDSGFSASIPVNLSINMKKGGPRTTLFEVCKKLQWPVPTFDS
TEYKDRSLFESCEGLQGTKGLNCFVSKITLCIPKYGNIECQGEARSDKKSSFDSAAVEML
LELQKLGKVEIDPPLSS
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaacaatgattcaccaggccataaccagactcaaagtaaaaaacgaaagcaa
ctcgatgctgataattctccatacctagaattgtctaattccaacatgaaccccagaagg
tatcaggtagaggtgtttcaagttgcatggagaaggaacacaatagctgtgttggataca
ggctctggtaagaccttgattgctgtgatgcttatgaaagaggttggtcaaaccatcaag
actttggcagtgaagaagctgattgtttttttggctcccacagttcatcttgtcaatcag
caattcaataatataaaatatctgacagattttcaagttgaggaatactatggggctaaa
ggagttgatacatggactttgaagacatgggagaaggagattagttccaatgatgtattg
gttatgacaccccagattcttttagatgccttaagaaaagcattcctgcgtatggaaatg
atatgcttgattgttatcgatgaatgtcatagagcaaccggcaaccatccatatacaaaa
ataatgaaggaattttatcaccaagcaaatgaaaagccaaagatttttgggatgacagca
tcaccagttggtaaaaaaggtgtttcctcttctacggattgtgaggatcaaatatcagaa
cttgaaagcatcttggatgctaagagatatactattgaagatcggacagagatggatgga
tatatattgtctgctcaagagagttgtagatattatgaccaagcacgattttctgcgttg
agtttgaaaccaaagattgaagccttgtggttcaagtttgatgcattgttatcagaaaat
aaaagtaactatgtggatgtggaaaataaatttaagacactgtctcaacggatgtccaat
gaacttggaaaaattttacattgccttgaagatcttggaatcctatgtgcttatgaggca
gttaaaatctgtcatgagaatttctccaaaactgaaggaatgtgtgaaatttacagaaca
tgttatcttcagtgtataacttttgttgaagaagtaataaaattaatcgaagaatccctc
catctagctgataaaaatattttgggggttgattttgattattcgaaggcagaagatatg
ggatacatatctccaaaattacttgaacttattaaaatcttccaatcacttgggtatgac
actatgatctattatataaatagttttcctttgaaacaatatgtaatatggcaaattggt
aatgtgtttctttctgtttatagagaatctagtcaggtggtgtgccttatttttgttgat
agaatcattacagctaaggtgattgaaggatttgcaaagaaagttccccagatttctcat
ttctctgtttcttatttaactggaaacaatacatcggttgatgctgtggctcctaaaagg
cagaaggagatattggattcttttcgttctggaaaggtcaatctattatttactactgat
gtacttgaggaaggaattcatgtgccaaactgctcatgtgtgatacggtttgacctccca
aagacggttcgtagttatgtccaatctcgtggaagatctaggcaggctaactcccaattt
gttgtgatgttggagaggggaaacctgaagcaaagaaatcaactctttgacatcattagg
agtgagcgctccatgactgatgcatctatgaataaggaccatgaatctagtttaagagta
tgtacaatggggaaaacagaggcatactatgtggaatctaccggagcttctgtgacttta
gattctagtgttaatcttatccaccgatactgtggaacacttccacgagatcagtactcc
tctgcaaagcccagttacgtgtttctgccagtggaagggggttaccaatgtaaattaaca
ttgccatctaattcagccctccagacaataattggtccttcaggaaaagatattcgtttg
gcaagacatcttgcttgttttgaagcttgtaagaagttgcatcaaatgggtgctttaaat
gaacatttggttccattaattgaaaatcattcagaagatgaccatattgtgaaaaataaa
gaatctagttcgggggcaggaaccacaaaaagaaaggagttacatggaacagccaacatt
cgtgcactaaatggtgcatggggagacaaacttgatgatgcagccagattttttgcctat
aaactagagtttgcatgtagtattgttagtgaaatatactctgggtttgttcttttgatt
gagtcaaagcttgatgatgatgtgggaaatatagattcagatctttatttagtctcaaag
accgtgaaagcttctgtctctccgtgtgggcaagttgatttggatgctaaacagatgatg
aaagcaaaatgcttccatgagctttttttcaatggtttgtttggtagattggtgtttagg
tcaaaatcagcaggaggaggaacagaatttttacttcaaaaagacacaaaatcattgtgg
agagaaaaacacttatatttgcttctaccacttgagaaattgaatggtatttgtggggga
gccttccaaattaattggcatggaatcagttcttgtgcatctgctattgaattcttaagg
aggaaattttctctgggcactggagattgtgatgataacggaataatcacatcacctcag
gataccagttcaatggagattgaatatgttggaacaaacaagattcactttgctaattgt
gtggttgatgctgacaatataaaagacacgttagttttggccattcacactggaaaaata
tattgtattattgacatcgacagtaacttatctgctgaaagtcctttctgtgaaaagtcc
aaggaccacgttaccttctcagattatttcagcaaaaggtatgggattacactgagacat
ccaagacagtctcttttactattaaagcaaagtcataatccacacaatcttctttttaac
ttccacgaggaagatggacgagacaagtcatcacaaattggctctacaacctccaaagtg
cctgcacatgtccacgtcccacctgagcttctatttgttcttgattttcaaagaaacgtg
ttgaggtcattgtacttgttaccatctctaatgtaccgcattgaatcgttaatgttatct
agtcagcttagagaagagatagatggtcaaactagcaagtccaacataaatagctcactg
attctagaagcacttacaactttgagatgcagtgaaagcttttcaatggaacgtcttgag
ttgctaggagattctgttttgaaatatgtggtgagctgtcacctctttcttaaatatccc
aagaaacacgaaggacaattatctaccagacgatcactagcagtttgtaattcaacactt
cataaactggcaatagatcgcaaattacagggttatattcgagactctgcatttgaacca
cgtcgttgggttgctccaggacagcgttctttacaccctgtttgttgtgattgtggattg
gatacccttgaagtgcctttagatgttaaattccacaccgaggatccaaaagttgtggtt
gggaagttttgtgacaggggtcaccgctggatgtgttctaagactattgctgactgtgtt
gaagctctgataggagcatactatgtgggtggtggactctttgcatcactcaatgttatg
aaatggcttggaattggcactgaacttgaactatccttggttgacgaagcaatcactgct
gcctctctgcatagttgcgtgctaaaagaaagtgagattgaatgccttgaaaagaaaatt
gggtatgaattttctgtcaagggactcttactggaggctatcacacatttgtcggagaaa
gaacttggtattggctgctgttatgagagactcgaatttcttggtgattcggtgttggac
ctgcttatcacatggcatctatatcagagtcacacagatattgatccaggggtgttgact
gacttacgatctgcttctgtcaataatgacaattttgctcaagttgctgttagacataac
cttcaccagcatctcctacatggctcgggattattactgagccaaatatcagaatatgcg
aaggccatttctgaatcagatcctagatcacatccaagcattagagctccgaaggcactt
ggagatctagtggaaagtattgttggggctttgctaattgataccaagctcagtcttgac
caagtgtgggaggttttctgtcccctattatcccccatagttacacctgaaaaacttgaa
ttgcctccatatcgtgaattaaatgaattgtgtgattctcttgggtattttgtaaaagta
aatgaaaattgtgaaaaaaagggatccatggtgcatgttgaggttagtgtacagttgcta
aatgatctgttggttcgtgaaggaaagggggtaaataaaaaaactgcaaaaggagaagct
tcatttcatttgttgaaggatcttgagaagcggggaatttcatattgtaatttcatgtcc
aagggaaaaagagataattctgtccatatgactgattcacctcatctgaaaagggattct
agtacttgttttactctaattgaagaacattcctcagagccggtaattaaaaggaacaga
ttggatggaactaacccaactgaaagtattttgcctctcaaagactcttccaatgacgac
tctggttttagtgcttccattccagttaatttatcaattaatatgaaaaagggaggacca
cggaccacactatttgaggtgtgtaagaaactacagtggccagtgcctacatttgattca
actgaatataaagatagatctctatttgaatcctgtgaaggcctgcaaggaaccaaggga
cttaactgttttgtttcaaaaattaccttgtgcatacccaagtatggaaatatagagtgc
caaggagaagctagaagtgataagaagagctcctttgactctgctgcagttgaaatgctt
cttgagctgcaaaaactgggaaaagttgaaattgatcctcccctttctagttag
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integrated database retrieval system
