Phaseolus vulgaris (common bean): 137820636
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Entry
137820636 CDS
T03093
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03410
Base excision repair
pvu03420
Nucleotide excision repair
pvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137820636
03410 Base excision repair
137820636
03420 Nucleotide excision repair
137820636
03430 Mismatch repair
137820636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
137820636
03036 Chromosome and associated proteins [BR:
pvu03036
]
137820636
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137820636
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137820636
DNA Replication Termination Factors
ELG1-RFC complex
137820636
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
137820636
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137820636
Check point factors
HRAD17(Rad24)-RFC complex
137820636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
AAA_16
RuvB_N
Mg_chelatase
AAA_24
AAA_11
AAA_5
AAA_assoc_2
DEAD
AAA_14
ResIII
SLFN-g3_helicase
Effector_1
ADK
DUF3802
nSTAND3
AAA_28
AAA_2
AAA_19
PhoH
DUF3853
AAA_30
AAA_18
AAA_7
NPHP3_N
AAA_25
ATPase_2
RNA_helicase
TIP49
Parvo_NS1
NB-ARC
IstB_IS21
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
137820636
NCBI-ProteinID:
XP_068480911
LinkDB
All DBs
Position
9:complement(19447259..19454678)
Genome browser
AA seq
338 aa
AA seq
DB search
MQSSQQWVEKYRPRKVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAH
QLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKRRKGHPCPPFKIIVLDEA
DSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRIL
YICKEEELCLDAEALSTLSSVSQGDLRRAITYLQSAARLFGSSISSENLISVSGVVPEKV
VQAVLQACRSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEDNDISDEQKARISKKLG
EADKCLVDGADEYLQLLDVVSNTMQAFSNMPEGFAYEC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctctcagcaatgggtcgagaaataccgaccaaggaaagtgaaagatgttgcc
caccaagaagaagttgttcgagtgctaacaaatacccttgaaactggaagttgcccccac
atgctcttctatggtcctcccggcactggaaaaacaactactgctcttgcaattgcccac
cagctttttgggcctgagctatataagtccagggtgctggagctgaatgcaagtgatgat
agagggattaatgttgttcgtacaaagataaaagattttgctgctgtggctgttggtact
aacaagcgtaggaagggtcatccttgtccaccatttaagattattgttctagatgaggct
gattcaatgacagaagatgctcagaatgccctgaggcgtacgatggaaacttactctaaa
gttacaaggttcttttttatatgcaactatgtgagcaggattatagaaccacttgcttca
agatgtgcaaaattcaggttcaagccattgtcagaagaaatcatgagcagccggattttg
tacatatgcaaagaagaggaactctgtcttgatgctgaggctctttcaacccttagttct
gtttctcaaggagatcttcgccgggcaatcacatacttgcagtctgcagctcgcttattt
ggatcttcaatttcttcagagaatctgatttctgtgtctggggttgttccagaaaaagtt
gtgcaggcagttcttcaagcttgcagaagtggtaattttgatctcgcaaacaaggaagtc
aacaatttcattgcagagggatatccagcttctcaaatgcttactcagttatttgaagcc
attgttgaagacaatgatatatcagatgaacagaaagcaagaatatccaagaagttgggt
gaagctgataagtgtctagttgatggtgctgatgaatacttgcaacttctcgatgtggtc
agcaatacaatgcaggcttttagcaacatgccagaaggatttgcttacgagtgttag
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