Phaseolus vulgaris (common bean): 137821317
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Entry
137821317 CDS
T03093
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
pvu03015
mRNA surveillance pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137821317
09122 Translation
03013 Nucleocytoplasmic transport
137821317
03015 mRNA surveillance pathway
137821317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137821317
03041 Spliceosome [BR:
pvu03041
]
137821317
03009 Ribosome biogenesis [BR:
pvu03009
]
137821317
03012 Translation factors [BR:
pvu03012
]
137821317
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137821317
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137821317
mRNA cycle factors
Stress granule specific factors
137821317
Spliceosome [BR:
pvu03041
]
Complex C
Other components
EJC/TREX
137821317
Ribosome biogenesis [BR:
pvu03009
]
Eukaryotic type
90S particles
Helicases
137821317
Translation factors [BR:
pvu03012
]
Eukaryotic type
Initiation factors
eIF-4
137821317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
TniB
Motif
Other DBs
NCBI-GeneID:
137821317
NCBI-ProteinID:
XP_068481938
LinkDB
All DBs
Position
9:36224193..36228242
Genome browser
AA seq
406 aa
AA seq
DB search
MATTSVVPANRRRAVNAADDMDFETTEGVKAIASFEEMGIKDDLLRGIYQYGFEKPSAIQ
QRAVTPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVREVQALILSPTRELASQTEKV
ILAIGDFINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKMLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVS
SMHGDMPQKERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacgtcggtggtgccggcgaaccggcggagggcggtgaatgcggcggatgat
atggacttcgagacgacggaaggtgtgaaggcgattgcgagcttcgaggagatggggatt
aaggacgatctgctccgtggaatctaccagtacggcttcgagaagccctctgctatacag
caacgggcggtcacgccaatcatccagggccgtgacgtcatcgcccaggcccaatccgga
actggcaaaacctccatgattgccctcaccgtttgccaagtcgtcgatacctccgttaga
gaagttcaggccttgatattatctccaacaagggaactggcctcacagactgagaaggtc
atattggctattggagatttcattaacatacaagcacatgcttgcattggaggtaaaagt
gtgggtgaagatattaggaaacttgagtatggagttcatgtggtgtctggaactcctggc
cgagtctgtgacatgatcaaaaggagaacattgcgcacaagggctatcaagatgctagtt
cttgacgaatctgatgagatgttgagcagaggatttaaggatcaaatttatgacgtgtat
agatatctcccacctgaccttcaggtttgcttgatttctgctacccttcctcatgaaata
ctggaaatgacaaacaaattcatgaccgatcctgtaaggatccttgtaaaacgtgatgaa
ttgacattggagggcatcaagcaattttttgttgcagttgaaagggaggaatggaagttt
gataccctgtgtgatctttatgataccctcacaatcactcaagctgttatattctgtaac
actaagcggaaggtggactggttaactgaaaaaatgcgtaacaataatttcacagtctca
tctatgcatggtgacatgcctcagaaagaaagagatgctattatgggagaattccgtgct
ggaacaactcgggtactaataacaactgatgtttgggcccgtggtcttgatgtacagcag
gtgtctctagttatcaattatgaccttccaaacaatcgagagctttacattcatcgaatt
ggtcgctctggacgttttggacgaaagggtgttgcgataaattttgtgaagagtgatgac
atcaagatcttgagagacattgagcaatactacagtactcagattgatgaaatgcccatg
aatgttgctgatcttatataa
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