Phaseolus vulgaris (common bean): 137821476
Help
Entry
137821476 CDS
T03093
Name
(RefSeq) uncharacterized protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvu03016
]
137821476
Enzymes [BR:
pvu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
137821476
Transfer RNA biogenesis [BR:
pvu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
137821476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
137821476
NCBI-ProteinID:
XP_068482186
LinkDB
All DBs
Position
11:130870..137633
Genome browser
AA seq
625 aa
AA seq
DB search
MRSWAEEREEKGEEMEDIEDLLVGSGSATAPGFRLPMAAAVGVGVGSKRNKLSSSPSPAI
PGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYSLSDNPEQADLWLINTCTVKSPSQSAMD
TIITKGKSSNKPLVVAGCVPQGSRYLKELEGISIVGVQQIDRVVEIVEETLKGHEVRLLT
RKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVIS
DGVKEIWLSSEDTGAYGRDIGVNLPTLLKALVAELPADASTMLRIGMTNPPYILEHLKEI
AEILRHPCVYSFLHVPVQSGSDTVLSAMNREYTVSEFRTVVDTLTELVPEMQIATDIICG
FPGETDEDFVQTVNLVKDYKFSQVHISQFYPRPGTPAARMKKVPSKVVKGRSRELTNVFE
SFTPYSGMEGKVERIWITDVASDGIHLVGHTKGYIQVLVLAPDHMLGASAMAKITSVGRW
SVFGEVIETVNHASDNKALNKLVPDRDLHSLCVNPAKAGGFSEEPESCACGSDVCCSIDK
SDVSRGTAVPQNQSNRNFFEWMLRKREHLHKKVESELASGSVKKQEGKMKKWDFVDKVLL
GGMSISIFTIIALVAALAFRVIWSQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagatcttgggcagaggagagagaagagaagggagaggagatggaggacattgaagat
ttgctggtcggaagcggaagcgcaactgcgccgggcttccgtttgccaatggcggcagct
gttggtgttggcgttgggagcaagcggaataaactctcctcttcgccttctccggcaatc
cccggcactcagactatctacataaagacctttggctgctctcacaaccagagtgacagt
gaatatatggctggccagctttcggcttttggctattcgttgagtgacaatccagagcaa
gcagatctctggctcattaacacttgcacagtgaaatcccccagtcaatctgccatggat
accatcataacaaaaggaaaatcttctaataaaccgctagttgttgctggctgtgtccct
caaggaagtcggtatttgaaagagctggaagggatcagcatagttggagtccagcaaatt
gatcgtgttgttgaaattgtagaggagactttaaaaggtcacgaagtgcgccttttgacc
cgtaagacattgccagcacttgaccttccaaaggtaaggaagaacaagtttgttgagatt
cttcctattaatgttggttgtttaggtgcctgcacttattgcaagacaaagcatgctcgg
ggtcacctaggaagttacacaatcgatagccttgttgggcgtgtaaaatctgtcatttct
gatggagttaaagagatatggcttagtagtgaggacactggagcatacggtcgtgacatt
ggtgtcaatcttccaactttgttgaaagccttagtggcagaactacctgctgatgcaagc
acaatgctacgtattggaatgaccaatccaccttatatccttgaacacttgaaagagata
gccgagattttgcggcacccatgtgtatactcttttctccatgtaccagttcagtctgga
agtgatactgtcttgagtgcaatgaatagggaatatactgtgagtgagttcaggactgtt
gtagatactctaactgagcttgtgccagagatgcagattgccactgatataatatgtgga
tttccgggtgaaactgatgaagattttgtgcagactgtcaatcttgttaaagattataag
ttctctcaagttcacatttcacaattttatcctcgaccagggacacctgctgcaaggatg
aaaaaggttccaagtaaagtggttaagggaagaagccgagagctgacaaatgtctttgaa
tccttcacaccatactctgggatggaaggcaaagtggaaagaatttggattactgacgtt
gcatctgatggaattcacttggttggtcatacgaaaggatatatacaagttcttgtactt
gctcccgaccatatgcttggagcttcagctatggctaagataacatctgtgggaaggtgg
tctgtctttggggaagtaattgagacagtcaaccatgcaagtgacaataaagctctaaac
aagttggttcctgaccgggacttgcattctctctgcgttaacccagccaaggctggtgga
ttctcagaagagccagaatcttgtgcctgtggaagtgacgtctgttgcagtatcgacaag
agtgatgtttcaagaggcactgcagtgccacagaaccaaagcaatagaaatttctttgaa
tggatgctaaggaagcgggagcatctgcacaaaaaggttgagagcgagcttgcctcggga
tctgttaaaaagcaggaaggaaagatgaagaagtgggacttcgttgataaggttcttttg
ggtggaatgtctatcagtatctttactataattgctctagtagcagctcttgcgttcaga
gtgatttggtcccagtaa
DBGET
integrated database retrieval system
