KEGG   Phaseolus vulgaris (common bean): 137821511
Entry
137821511         CDS       T03093                                 
Name
(RefSeq) replication factor C subunit 2-like isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03030  DNA replication
pvu03410  Base excision repair
pvu03420  Nucleotide excision repair
pvu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137821511
   03410 Base excision repair
    137821511
   03420 Nucleotide excision repair
    137821511
   03430 Mismatch repair
    137821511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvu03032]
    137821511
   03036 Chromosome and associated proteins [BR:pvu03036]
    137821511
   03400 DNA repair and recombination proteins [BR:pvu03400]
    137821511
DNA replication proteins [BR:pvu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137821511
  DNA Replication Termination Factors
   ELG1-RFC complex
    137821511
Chromosome and associated proteins [BR:pvu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137821511
DNA repair and recombination proteins [BR:pvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137821511
  Check point factors
   HRAD17(Rad24)-RFC complex
    137821511
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 AAA_16 RuvB_N Mg_chelatase AAA_24 AAA_11 AAA_5 AAA_assoc_2 DEAD AAA_14 SLFN-g3_helicase ResIII Effector_1 ADK nSTAND3 AAA_28 AAA_2 DUF3853 AAA_30 AAA_19 PhoH AAA_18 AAA_7 NPHP3_N RNA_helicase AAA_25 ATPase_2 TIP49 Parvo_NS1 DUF815 IstB_IS21 DNAX_ATPase_lid
Other DBs
NCBI-GeneID: 137821511
NCBI-ProteinID: XP_068482237
LinkDB
Position
9:complement(19468074..19477644)
AA seq 362 aa
MVSGWFWKRCSSKKKVCENKTASVMQSSQQWVEKYRPRKVKDVAHQEEVVRVLTNTLETG
SCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAV
AVGTNKRRKGHPCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIE
PLASRCAKFRFKPLSEEIMSSRILYICKEEELCLDAEALSTLSSVSQGDLRRAITYLQSA
ARLFGSSISSENLISVSGVVPEKVVQAVLQACRSGNFDLANKEVNNFIAEGYPASQMLTQ
LFEAIVEDNDISDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTMQAFSNMPEGFAY
EC
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggttagtggatggttttggaaacgttgttcgtcgaagaagaaagtgtgtgaaaataag
acggcctcagtcatgcagagctctcagcaatgggtcgagaaataccgaccaaggaaagtg
aaagatgttgcccaccaagaagaagttgttcgagtgctaacaaatacccttgaaactgga
agttgcccccacatgctcttctatggtcctcccggcactggaaaaacaactactgctctt
gcaattgcccaccagctttttgggcctgagctatataagtccagggtgctggagctgaat
gcaagtgatgatagagggattaatgttgttcgtacaaagataaaagattttgctgctgtg
gctgttggtactaacaagcgtaggaagggtcatccttgtccaccatttaagattattgtt
ctagatgaggctgattcaatgacagaagatgctcagaatgccctgaggcgtacgatggaa
acttactctaaagttacaaggttcttttttatatgcaactatgtgagcaggattatagaa
ccacttgcttcaagatgtgcaaaattcaggttcaaaccattgtcagaagaaatcatgagc
agccggattttgtacatatgcaaagaagaggaactctgtcttgatgctgaggctctttca
acccttagttctgtttctcaaggagatcttcgccgggcaatcacatacttgcagtctgca
gctcgcttatttggatcttcaatttcttcagagaatctgatttctgtgtctggggttgtt
ccagaaaaagttgtgcaggcagttcttcaagcttgcagaagtggtaattttgatctcgca
aacaaggaagtcaacaatttcattgcagagggatatccagcttctcaaatgcttactcag
ttatttgaagccattgttgaagacaatgatatatcagatgaacagaaagcaagaatatcc
aagaagttgggtgaagctgataagtgtctagttgatggtgctgatgaatacttgcaactt
ctcgatgtggtcagcaatacaatgcaggcttttagcaatatgccagaaggatttgcttac
gagtgttag

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