Phaseolus vulgaris (common bean): 137821511
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Entry
137821511 CDS
T03093
Name
(RefSeq) replication factor C subunit 2-like isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03410
Base excision repair
pvu03420
Nucleotide excision repair
pvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137821511
03410 Base excision repair
137821511
03420 Nucleotide excision repair
137821511
03430 Mismatch repair
137821511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
137821511
03036 Chromosome and associated proteins [BR:
pvu03036
]
137821511
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137821511
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137821511
DNA Replication Termination Factors
ELG1-RFC complex
137821511
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
137821511
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137821511
Check point factors
HRAD17(Rad24)-RFC complex
137821511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
AAA_16
RuvB_N
Mg_chelatase
AAA_24
AAA_11
AAA_5
AAA_assoc_2
DEAD
AAA_14
SLFN-g3_helicase
ResIII
Effector_1
ADK
nSTAND3
AAA_28
AAA_2
DUF3853
AAA_30
AAA_19
PhoH
AAA_18
AAA_7
NPHP3_N
RNA_helicase
AAA_25
ATPase_2
TIP49
Parvo_NS1
DUF815
IstB_IS21
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
137821511
NCBI-ProteinID:
XP_068482237
LinkDB
All DBs
Position
9:complement(19468074..19477644)
Genome browser
AA seq
362 aa
AA seq
DB search
MVSGWFWKRCSSKKKVCENKTASVMQSSQQWVEKYRPRKVKDVAHQEEVVRVLTNTLETG
SCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAV
AVGTNKRRKGHPCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIE
PLASRCAKFRFKPLSEEIMSSRILYICKEEELCLDAEALSTLSSVSQGDLRRAITYLQSA
ARLFGSSISSENLISVSGVVPEKVVQAVLQACRSGNFDLANKEVNNFIAEGYPASQMLTQ
LFEAIVEDNDISDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTMQAFSNMPEGFAY
EC
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggttagtggatggttttggaaacgttgttcgtcgaagaagaaagtgtgtgaaaataag
acggcctcagtcatgcagagctctcagcaatgggtcgagaaataccgaccaaggaaagtg
aaagatgttgcccaccaagaagaagttgttcgagtgctaacaaatacccttgaaactgga
agttgcccccacatgctcttctatggtcctcccggcactggaaaaacaactactgctctt
gcaattgcccaccagctttttgggcctgagctatataagtccagggtgctggagctgaat
gcaagtgatgatagagggattaatgttgttcgtacaaagataaaagattttgctgctgtg
gctgttggtactaacaagcgtaggaagggtcatccttgtccaccatttaagattattgtt
ctagatgaggctgattcaatgacagaagatgctcagaatgccctgaggcgtacgatggaa
acttactctaaagttacaaggttcttttttatatgcaactatgtgagcaggattatagaa
ccacttgcttcaagatgtgcaaaattcaggttcaaaccattgtcagaagaaatcatgagc
agccggattttgtacatatgcaaagaagaggaactctgtcttgatgctgaggctctttca
acccttagttctgtttctcaaggagatcttcgccgggcaatcacatacttgcagtctgca
gctcgcttatttggatcttcaatttcttcagagaatctgatttctgtgtctggggttgtt
ccagaaaaagttgtgcaggcagttcttcaagcttgcagaagtggtaattttgatctcgca
aacaaggaagtcaacaatttcattgcagagggatatccagcttctcaaatgcttactcag
ttatttgaagccattgttgaagacaatgatatatcagatgaacagaaagcaagaatatcc
aagaagttgggtgaagctgataagtgtctagttgatggtgctgatgaatacttgcaactt
ctcgatgtggtcagcaatacaatgcaggcttttagcaatatgccagaaggatttgcttac
gagtgttag
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