Phaseolus vulgaris (common bean): 137821773
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Entry
137821773 CDS
T03093
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137821773
Transcription machinery [BR:
pvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137821773
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
DUF4385
Sigma70_r4_2
HTH_11
GerE
Motif
Other DBs
NCBI-GeneID:
137821773
NCBI-ProteinID:
XP_068482625
LinkDB
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Position
9:20739073..20742539
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AA seq
513 aa
AA seq
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MGVVTVSSSAARTPLGLNTKFSCNRLKRPLIIAFKGDKHDDSALVATQEKIPVPVETSKT
QKKKMGKAKKLPKRERVAFVEENSQTSLDVDYNEAAAMLENIYKLSPASDTANAECMDGK
IKRVSRRRKKIVDDCEEKDVNDDRVVRNQNKKAKRLGLDQRISLKSNTDGDEVVPTQKKR
NANNSVEKIEELIREYSASTDFVGMDWRRMKIPPVLSSSEHAWLFKLMQPVKTILQVKED
LQKELAREPADGELANATNMSIAHVKKALEVGQAARNKLIKHNLRLVLFVINKYFTDFAS
GSRFQDLCQSGVKGLMTAIDRFEPNRRFRLSTYSLFWIRHAITRSMTLSSFTRVPFGLES
VRGEIQKAKTKLTFELQRSPTEEEIIERVNISPERYHDVMKASKSILSLNSRHITTQEEF
INGVVDDDGVNGDNSKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIARN
LNISREMVRKHEVKALMKLKHSARLDYLRRYVV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctcagcagcgaggactccattgggattgaatacaaag
ttttcctgtaatcgtctgaagagacctttaattatagcatttaaaggggataaacacgat
gactcagctttggttgcaactcaagagaaaatccctgtgcccgttgagacatccaagacg
cagaagaaaaagatggggaaagctaagaaactgcctaagagagaaagggttgcctttgtg
gaggaaaattcccaaacttccttggatgtggactataatgaagctgctgctatgcttgaa
aatatatacaaactcagccctgcttctgatactgctaatgcagaatgtatggatggtaaa
atcaaaagggtctcccggagaaggaagaagatcgttgacgattgtgaagaaaaggatgta
aacgatgatagggtggtcagaaaccagaacaagaaagctaaacggttgggtcttgatcag
aggatttcattaaagagtaacacagatggggacgaagtcgttcccacacaaaagaaaaga
aatgctaacaatagtgttgagaagattgaagaacttattagggaatattccgcatcaact
gattttgtgggtatggactggagaagaatgaaaatacctcccgttctttcttcttcagag
catgcttggttgttcaaattgatgcaacctgtgaagacaatacttcaagtgaaagaagat
ttacagaaggagctagcaagagaacctgctgatggagaactagccaatgcaacaaacatg
agcattgctcatgtaaagaaagcactggaggttggccaagctgcaagaaacaaactcata
aagcacaatctccggcttgtcttgttcgtgatcaacaaatattttacagattttgcaagt
ggctctaggtttcaagatctttgtcagtcaggagttaagggacttatgacagcaattgat
cgctttgagccaaacagaagatttcggctatcaacatatagtttattttggataagacat
gctatcactcgttcaatgaccctctcaagcttcacacgtgttccatttggacttgaatcg
gttcgaggagaaatccaaaaagctaaaactaagttaacatttgagcttcagaggtcacca
acggaggaagaaataatagaaagagttaatatatccccggaaagataccatgacgtaatg
aaagcatcaaaatccattctttcgctgaactcgaggcatataactacacaggaggagttc
attaacggggtcgttgatgatgatggtgttaatggtgataatagtaagcaacctgctcta
ctaagacttgctcttgatgatgtgcttgattccctgaagccgaaggagagcttggtgatc
agacagagatttggacttgatgggaagggtgacagaacgttgggagaaattgctaggaac
ttgaatatatcaagggaaatggtaagaaagcacgaagtgaaggctcttatgaagctcaag
cattcagctcgattggattatcttcgtcgttatgttgtataa
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