KEGG   Phaseolus vulgaris (common bean): 137821826
Entry
137821826         CDS       T03093                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03030  DNA replication
pvu03410  Base excision repair
pvu03420  Nucleotide excision repair
pvu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137821826
   03410 Base excision repair
    137821826
   03420 Nucleotide excision repair
    137821826
   03430 Mismatch repair
    137821826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvu03032]
    137821826
   03036 Chromosome and associated proteins [BR:pvu03036]
    137821826
   03400 DNA repair and recombination proteins [BR:pvu03400]
    137821826
DNA replication proteins [BR:pvu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137821826
  DNA Replication Termination Factors
   ELG1-RFC complex
    137821826
Chromosome and associated proteins [BR:pvu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137821826
DNA repair and recombination proteins [BR:pvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137821826
  Check point factors
   HRAD17(Rad24)-RFC complex
    137821826
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_assoc_2 AAA_16 AAA_11 DUF815 RuvB_N AAA_5 ATPase_2 DNAX_ATPase_lid AAA_14 AAA_30 bpMoxR AAA_7 AAA_19 AAA_3 AAA_24 ResIII nSTAND3 NB-ARC AAA_25 AAA_18 TniB DUF3086 TIP49 Gp44_lid AAA_28
Other DBs
NCBI-GeneID: 137821826
NCBI-ProteinID: XP_068482692
LinkDB
Position
9:complement(19192495..19197987)
AA seq 359 aa
MTTHPMEIDSDGDDHTHSAGECVIGSEDLPAFDKAIPWVEKYRPQSLDDVAAHRDIVDTI
DKLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQQI
QDFASTQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII
PALQSRCTRFRFAPLDAVHVTERMKHVIKAEGLDVQDDGLVALVRLSNGDMRKALNILQS
THMATQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYTDSFKRIEEMKTRKGLALVDIIR
EVIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAAT
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgacgacccatcccatggaaatcgacagcgacggcgatgaccacacacactccgccggc
gaatgtgtcataggttccgaagaccttcccgctttcgacaaggccattccgtgggttgaa
aaataccgccctcagtccctcgacgacgtggccgctcaccgtgacattgttgataccatt
gataagctgaccacagagaaccgattgccgcatcttttattgtatggccctcctggaacg
ggcaaaacatcaaccattctcgctgtggcacgcaaactatatggttcacgcttccgcaat
atgattttggaactcaatgcatcagatgacagaggaattgatgtcgtgcgacagcagatt
caagattttgctagcactcagagcttatcatttggtgttaagtactctgtaaaactggta
ttgttagatgaagcagatgccatgacaaaggatgcccaatttgcattacgtagagtgatc
gagaaatatacaaaaagcaccaggtttgctcttatctgtaatcatgtaaacaagattatt
cctgcacttcaatctagatgcactcggtttcggtttgcccctcttgacgccgtccatgtc
actgaaagaatgaaacatgttattaaggctgaagggcttgatgttcaagatgatggctta
gtagctcttgttcggcttagcaatggtgatatgagaaaggctttgaatattcttcagtca
acacatatggctactcagcagataacagaagaagctatttacctgtgcactggaaatcca
ttgcccaaagacatagagcagatatcttactggcttctaaacgaacaatatacagatagc
tttaaaagaatagaagaaatgaagaccaggaaagggttggccctggttgatattatcaga
gaagtgataatgtttgtttttaagattaagatgccttcagctgttcgagtacaattgatg
aatgatttggcagacatagagtacagattaagttttgggtgcaacgataagcttcagctt
ggatcggtcattgcttcttttacacgtgctagatccgcactggttgcagctgctacatag

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