Phaseolus vulgaris (common bean): 137821917
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Entry
137821917 CDS
T03093
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03020
RNA polymerase
pvu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137821917
09124 Replication and repair
03420 Nucleotide excision repair
137821917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137821917
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137821917
Enzymes [BR:
pvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137821917
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
137821917
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
137821917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
137821917
NCBI-ProteinID:
XP_068482821
LinkDB
All DBs
Position
9:34621520..34636376
Genome browser
AA seq
1196 aa
AA seq
DB search
MELEDEYEEQMMEDEEEEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQSDSAETVYKISFGQIYLSKPMMTESDGETASLFPKAARLRNL
TYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT
QMMDLLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGIGE
YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RAYVQKCVDNGKDVNLQFAIKAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDRQRLLIKKKDIHALQQRESPEEGGWHDL
VSKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSI
SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDSISKAL
HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSF
ECRGCKNKTDIVQVFIPYACKLLFQELMAMAIAPRMLTKDVKSKKDQRRREPHKHV
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggagttggaagacgagtacgaggagcaaatgatggaggatgaagaggaggaggacgag
atcacgcaggaagacgcgtgggccgttatctcggcgtacttcgaagagaaaggcctcgtt
cgtcaacagctcgattccttcgacgagttcatccagaacaccatgcaggaaatcgtcgac
gagtctgctgacattgaaattcgacccgagtctcagcacaatcccggccaccaatccgat
tctgcagagactgtttataaaatcagttttggtcagatttacttgagtaagcctatgatg
acggagtctgatggagaaacggcctcgttgtttcccaaggctgctaggttaaggaacctc
acgtattcagctcctttgtatgttgatgtctctaagagggttataaagaaggggcacgat
ggtgaagaggtcactgagactcaggatttcacgaaagttttcattggcaaggttcctata
atgcttcggtctagttactgcacattataccagaattcagagaaggatttgactgagctt
ggggaatgtccgtatgatcaaggagggtatttcattattaatgggagtgagaaagttctg
attgctcaggagaagatgagcaccaaccatgtctatgtctttaagaagaggcagccaaac
aagtatgcctatgtggctgaagttcggtccatggcggagtcacagaacagaccacccagt
actatgtttgtgcgcatgctctctcggactagttccaaagggggttcttcaggacaatat
atacgtgccactcttccttacattcgaactgaaattcccatcattattgtgtttcgagca
ttggggtttgttgctgataaagatatattagaacatatatgctatgacttttcggatact
caaatgatggatttgctacgtccttctctggaagaagcgttcgtaattcaaaatcaacag
gttgcacttgactatattgggaaaagaggatccactgttggtgtaaccaaggaaaagaga
attaagtatgctaaggagatccttcaaaaggagatgctccctcacgttggcattggagaa
tattgtgagaccaagaaagcttactattttggatatatcattcaccggttactactctgt
gcgcttgggcggagagctgaggatgatagggatcattacggaaacaagaggctggatctg
gccggtcctttacttggtggtctttttagaatgctattcagaaagctaactagagatgtc
agggcatatgtacagaagtgtgttgataatgggaaagatgttaatctgcaatttgctatc
aaagcaaaaactgtcactagtggacttaaatactcacttgctactggtaattgggggcaa
gcaaatgctgcagggactagagctggagtttcacaggtgctgaatcgtttaacctacgca
tccactttatctcacttgcgaagactgaattccccaatagggcgtgaagggaagttggcc
aaaccaagacagctgcataattcacaatggggaatgatgtgtccagcagaaacacccgaa
ggacaagcctgtggactggtgaagaatctggcattgatggtctacataacagttggttca
gctgcatatcctattctagagtttttggaagaatggggcacagagaattttgaggaaatt
tctcctgcagtgattccccaagcaacaaaaatttttgtaaatggttgctggatgggtatc
catcgtgatcctgatatgttggtgagaacattaagaaagctgagacgaagggttgatgtt
aacactgaagttggggttgtcagagacatccgtcttaaagaattgcgtatatatacagat
tatggtcgttgcagtcgtcctttattcattgtggataggcaaaggcttctcataaagaag
aaggatattcatgctttacaacagagggaatcccctgaagagggtggatggcatgatcta
gtttccaagggctttatagaatatattgacacggaagaagaagagactacaatgatttcc
atgacaattaatgatcttgtacaagctaggatcaatccagaagaagcatattctgatact
tatactcattgtgaaatccacccatcactgattttgggtgtatgtgcttccatcatacca
tttcctgatcacaatcagtccccacgtaatacttatcagtctgcaatgggaaagcaagca
atgggaatatatgttaccaactaccagtttcgaatggacaccttggcctatgttttatat
tatccgcaaaagccactagtcactacaagagccatggagcatcttcacttccgtcaactc
ccagctggaattaatgccatcgtggccatttcctgttattctggttacaatcaagaagat
tctgtgatcatgaaccagtcatcaatagatcgtggattctttcggtctctgtttttccgt
tcatatagagatgaagagaaaaagatgggaaccctagtcaaagaagattttggccgtcca
gatagagctaacaccatgggaatgagacacggttcttatgataagctggacgatgatggt
cttgcaccaccaggcacaagagtatctggtgaggatgttattattggaaagaccacccca
atatctcaggaggaggctcagggacaagctttacgatacactaggcgtgatcacagcata
agcttacgtcacagtgaaactggaattgttgatcaagttttgctaacaacaaatgctgat
ggattgagatttgtgaaagtaagagtgagatctgttcgtataccacagattggtgacaaa
ttcagtagtagacatggtcagaagggaactgttggtatgacttatactcaagaagacatg
ccttggactgtagaaggcatcacccctgatattattgtcaatccacatgccattccttct
cgaatgacaattggtcagcttattgagtgtatcatggggaaggtggcagctcacatggga
aaagaaggagatgctactccttttacagatgttactgtggacagtatcagcaaagctcta
cacaaatgtgggtatcaaatgcgtggttttgagactatgtacaatggtcatacagggaga
cgtctcagtgcaatgattttccttggtcctacgtattaccaaagattgaagcacatggtt
gatgacaagatccattctcgtggccggggtcctgtgcagatcctcacaaggcaacctgct
gagggaaggtcacgagatggaggtcttcgatttggagagatggaacgagattgcatgata
gctcatggagctgctcatttcctgaaggaaaggttgtttgatcaaagtgatgcatatagg
gtccatgtatgtgagaaatgtgggttgatagctattgcaaatctcaagaagaattccttt
gagtgcagggggtgcaaaaacaaaactgacattgttcaggttttcattccttatgcttgt
aaactcctcttccaagagttaatggctatggccatagctccaagaatgcttacaaaggac
gtcaaatctaaaaaggaccaaagaagaagggagcctcataaacatgtttga
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