Phaseolus vulgaris (common bean): 137822563
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Entry
137822563 CDS
T03093
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvu04131
]
137822563
04121 Ubiquitin system [BR:
pvu04121
]
137822563
Enzymes [BR:
pvu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137822563
Membrane trafficking [BR:
pvu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
137822563
Ubiquitin system [BR:
pvu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137822563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-Nse
zf-ANAPC11
zf-RING_16
zf-RING_5
Rad50_zn_hook
DUF7560
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
137822563
NCBI-ProteinID:
XP_068483568
LinkDB
All DBs
Position
9:18789609..18792235
Genome browser
AA seq
350 aa
AA seq
DB search
MSLSPPRERYNGHGQRRERPTFQMYWCFQCNRMVRIAVDNNPSEVTCPRCFGQFICEVNV
PRPRLVVDFTTADPSPEARLLEALSLMMEPPIRRFPGLLQSQPEEIPVHHRRRRFRRRQP
EPEPVQEPAHHRPRTWIVFQPMDQPNPFLPINNIPNGPGPGQFPFPLPRTVDTRDYFMGP
GLNELIEQITENDRQGPAPAPERAIDAIPTVKIASAHLKENSQCPVCQEEFEVGGEAREL
ACKHIYHSDCIVPWLRLHNSCPVCRHEVSVPSSSEEDECVDVSGDEGRLRRCLRWTRRFT
SVWPFNSRYRRVHPQGNNNVAAASSRGYFASDSPTLSRAANRRQPSCCIL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgagtcctccgagagagagatacaatgggcatggccaaaggcgagagaggcca
acgttccaaatgtactggtgcttccagtgcaaccgcatggtccgcatcgcagtggataac
aacccctcagaggtcacgtgtccacgctgcttcggccaattcatatgcgaagtaaacgtg
ccgcgcccaagactggtggtcgatttcactaccgcagacccctccccagaagcgcgtttg
ctcgaagcgctttccctcatgatggaaccacccatccgccgcttcccgggtctcctccaa
tcccaaccagaagaaattcccgtgcaccaccgccgccgacgcttccgtcgacgccaaccc
gaacctgaacccgtccaagaacctgcacaccaccgccctcgcacgtggatagttttccag
cccatggaccaacccaaccccttcctgcccattaacaacattcctaacggccccggtcca
ggccaattcccattcccgctcccgcgcaccgtggacacgcgcgactatttcatgggacct
ggactcaacgaactcatcgaacagataaccgagaacgacagacagggtcccgcgccggcg
ccggaaagggccatcgacgcgattccgacggtgaaaattgcgagcgcgcatctgaaggag
aattctcagtgtccagtttgtcaggaggaattcgaagttggcggagaagcgagggaactt
gcgtgcaaacacatatatcactcggattgcattgttccgtggctgaggcttcacaattct
tgcccagtgtgccgccacgaggtttccgtaccttcttcttcggaggaggatgagtgtgtt
gatgttagcggagatgaaggtaggttgcggaggtgcttgaggtggacccgtcgttttact
tcggtttggcctttcaattcgaggtatagacgggttcaccctcaaggaaataataatgtt
gctgctgcttcttccaggggatattttgcatctgacagtccgacactctctagagcagct
aataggaggcaaccctcttgctgcattctttag
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