Phaseolus vulgaris (common bean): 137822594
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Entry
137822594 CDS
T03093
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03420
Nucleotide excision repair
pvu03430
Mismatch repair
pvu03440
Homologous recombination
pvu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137822594
03420 Nucleotide excision repair
137822594
03430 Mismatch repair
137822594
03440 Homologous recombination
137822594
03460 Fanconi anemia pathway
137822594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvu03000
]
137822594
03032 DNA replication proteins [BR:
pvu03032
]
137822594
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137822594
Transcription factors [BR:
pvu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137822594
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137822594
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137822594
MMR (mismatch excision repair)
137822594
DSBR (double strand breaks repair)
HR (homologous recombination)
137822594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
RMI1_C
DUF223
Motif
Other DBs
NCBI-GeneID:
137822594
NCBI-ProteinID:
XP_068483604
LinkDB
All DBs
Position
9:34358964..34362170
Genome browser
AA seq
631 aa
AA seq
DB search
MSVNLTENAIPAIIGGDVNAKPLVQVLDVELVANTNNSQKQRYRLLLSDAVSSHHAMLAI
QLYDRVRTGQVRKGSVVQLLDYICSPSKNRKIIVVLNMETIIADFEIIGNPKLCVDSDLP
SVRAVADNTVARSNSSSDNISNSAARNASHDNAQNFRPTIQPPYQPPPVYKGRGAVMKNE
APARIIPIAALNPYQGRWAIRARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCF
NAVVDRFYSVIEVGKVYMISKGSLKPAQKNFNHLKNEWEVFLESTSTVELCPDEDDSIPR
QQFSFRPISDIENVDNNAILDVIGVVTSVNPSVPILRKNGMETQRRILSLKDSSGRSVEL
TLWGEFCNREGQQLQEMVDAGISPILAVKAGKVNDFSGKSIGSISTTQLFINPEFPEANS
LREWFDLVGKDSASLSISKDVIPGGTKNEVRKTISQIKDEGLGQSDKPDWITIRATISFI
KTDTFCYTACPLMIGDRQCNKKVTRSGNTRWQCDRCNQEFEECDYRYLLQAQIQDGTGLT
WVTAFQEAGEEIMEYSAKDLYLLKHEQQDDESFGEIIKSRLFKQFMFRLKIKEELYGDEQ
KVKITVVKVDKVKYSSESQYMLDSISKFCRQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaatctgacagaaaacgcgattccggcgataatcggcggcgatgtgaacgcc
aaaccgcttgttcaggttctggacgtagagttagtcgccaataccaacaactcgcagaag
cagagataccgtcttctgctttccgacgccgtttcgtctcaccacgcgatgctcgccatt
cagctctacgatcgagtccgaaccggtcaagttcggaagggttcggttgttcagcttctc
gattatatatgctctccttccaagaaccgcaagattatcgtggttctaaacatggaaact
ataatagctgattttgagatcattgggaatccgaagctatgcgtggattcagatttacca
agtgtgagagctgtagctgataacactgtggccaggagtaatagtagtagtgataatatt
agtaattctgctgctcgaaatgcaagtcatgataacgcccagaatttcaggccaacaatt
caacctccataccaaccgcctccagtttacaaaggccgtggggcagttatgaaaaatgag
gcgccagcacgcatcattcctatagctgctttaaatccttatcaaggtcggtgggctatc
agggcaagggtaactgctaaaggggatctgcgccgctacaataatgcacgcggtgatgga
aaagtcttctcatttgatctcctcgattctgatggaggcgaaatacgagtaacatgcttt
aatgctgttgttgatcgcttctatagtgtaattgaggttggtaaagtttacatgatatca
aaaggtagcttaaaacctgcacagaagaatttcaaccatctgaagaatgaatgggaagtt
tttttggaatcaacttcaacagtagagctgtgcccagatgaggatgattctatacctaga
cagcagttctccttccgacctatcagtgacattgagaatgttgacaataacgccatcctt
gatgttattggggttgtgacatctgtgaacccttctgttcccatcttgaggaagaatgga
atggaaacccagagaagaattttgagtctaaaagacagttctggcaggagtgttgaactt
acactgtggggagaattttgcaacagggaagggcaacagttgcaagagatggtagatgcc
ggaatttcccctattttagcagtcaaagcggggaaggtgaatgattttagtggaaagtcg
ataggctctatctctaccacccagctattcataaatcctgagttccctgaggccaatagc
ttaagagaatggtttgatctagtaggaaaagattctgcttccctttcaatttctaaggac
gttattcctggaggaacaaagaatgaggttcgcaaaactatatcccaaatcaaggatgaa
ggtctgggacagtcagacaagccagactggataacaataagggcaaccatatcattcatc
aagactgatacattttgttacactgcttgccctctgatgattggagatcgacaatgcaat
aagaaagtgactaggtcaggaaacacaagatggcaatgtgatagatgcaatcaggaattt
gaggagtgtgactaccgataccttctccaagctcaaattcaggatggcacaggattaact
tgggtaactgctttccaggaagcaggtgaagagattatggagtattcagcgaaagatctg
tacttgttgaaacatgaacaacaggatgatgagagctttggagaaataatcaagagccga
ctcttcaaacagtttatgtttagactgaaaatcaaagaggaattatatggcgatgaacag
aaggtcaagattactgtagttaaggtagataaggttaaatattcttcagagagtcaatac
atgcttgattcgatttccaagttttgtaggcagtga
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