Phaseolus vulgaris (common bean): 137822638
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Entry
137822638 CDS
T03093
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03082
ATP-dependent chromatin remodeling
pvu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137822638
03083 Polycomb repressive complex
137822638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvu03036
]
137822638
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
137822638
Histone modification proteins
HAT complexes
HATB complex
137822638
HDAC complexes
Sin3A-HDAC complex
137822638
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
137822638
PRC2.2
137822638
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
137822638
Heterochromatin formation proteins
Other heterochromatin formation proteins
137822638
Chromatin remodeling factors
NuRD complex
137822638
NuRF complex
137822638
NuRF complex (fruit fly)
137822638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
eIF2A
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
137822638
NCBI-ProteinID:
XP_068483679
LinkDB
All DBs
Position
9:34879329..34885752
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AA seq
500 aa
AA seq
DB search
METPPQQGVVKKKETRGRKPKPKDDKKEEHSKTKEGRKTQQYQQQQQQQQQPSVDEKYTQ
WKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANC
EVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVL
VWDVENQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIE
DHITSAATGGSIIKPKSGDANDKNADSPAVGPRGVYCGHEDTVEDVTFCPSSAQEFCSVG
DDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSIRMFDRRNLTT
NGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERSGKSISA
PPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEEV
LAELEKFKSHVVACASKSEK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggagactcctccgcagcaaggtgtggtgaagaagaaggagacaaggggtcgtaaacct
aagccaaaggacgataagaaagaggaacattccaagacaaaggaagggagaaaaacacag
caatatcagcagcaacagcagcagcagcaacaaccttcggtggacgagaaatacacgcaa
tggaagtcccttgttcctgttctctacgactggctcgccaaccacaacctcgtttggccc
tctctctcttgcaggtggggccctcagcttgaacaagccacttacaagaatcgccagcga
ctctatctttctgagcagactgatggtagtgtgccgaatactctggtgattgcgaactgc
gaggttgtgaagcctagggttgctgctgcagagcacatttctcagtttaatgaagaggca
cgttccccgtttgtgaagaagttcaagaccatcatacatcctggcgaggtgaacagaatt
agggaattaccacaaaattccaagatagtggcgacacatacagatagccctgatgtcctt
gtttgggatgttgaaaatcaaccaaaccgtcatgctgtccttggagctacaaactctcgg
cctgatttgatattaactggacaccaagataatgcagaatttgctcttgcaatgtgccca
actgagccctatgttctttcaggaggaaaggacaaaacggtggtattgtggagtattgaa
gaccatataacatctgctgccacaggtggatcaattatcaagccaaagtctggagatgcc
aatgataaaaatgctgatagccctgctgtagggccacgaggtgtttactgtgggcatgag
gatactgttgaagatgtgactttctgtccatctagtgcacaggagttctgtagtgttgga
gatgattcttgtctcatattatgggatgcacgtgttggctctagccctgtggttaaggtt
gaaaaagctcataatgctgatcttcactgtgttgattggaatccacatgatgataatctg
attctaactgggtcagcagataattctattcgcatgtttgatcgccgcaatctcaccact
aatggagttggatcacccatccataaatttgagggtcacaaagctgctgttctttgtgtt
cagtggtctccagacaaatcatctgtattcggaagttcagctgaggatggtctcttgaac
atttgggactatgagaaggttggtaaaaaaatagagcgatctggaaaatcaataagtgct
cctccagggttgtttttccaacatgcaggtcatagggataaagtagttgattttcattgg
aatgcatatgatccatggacaattgttagcgtgtctgatgactgtgaaagtaccggtgga
gggggaacattgcagatatggcgcatgagtgatttgatctacagaccagaagaggaggtt
ttggcagagctggagaaattcaaatctcatgtagtggcttgcgcttcaaagtctgaaaaa
tga
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