Phaseolus vulgaris (common bean): 137822757
Help
Entry
137822757 CDS
T03093
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu00040
Pentose and glucuronate interconversions
pvu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137822757
Enzymes [BR:
pvu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137822757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
137822757
NCBI-ProteinID:
XP_068483848
LinkDB
All DBs
Position
9:complement(19156555..19158404)
Genome browser
AA seq
439 aa
AA seq
DB search
MAGSASKVVFSLLVTLAITIPCLEAGIAEFDDFLKAQSEKAHKIALESYVPTPEFVASEL
NYHVHLSMLNSTRRGLKAGNNDAGAPCDSSNPIDNCWRCNKDWANDRYRLAKCGKGFGRR
AVGGLGGPIYVVTDNSDEDMVNPKEGTLRYGVTQKGPLWITFARSMIITLQQELLISSDK
TIDGRGANVQIRDGAGLTMQFVNNVIIHGIRVKNIVSKEGGMIRDSYNHVGLRTRSDGDA
ISVFGASNIWIDHVSLSNSDDGLIDVIQGSTAITISNCHMTRHNDVMLFGATDTYSGDKI
MQITVAFNHFGQGLIQRMPRCRMGFFHVLNNDYTHWMMYAIGGSAAPTILSQGNRFIAPN
NDAAKEITHRVDAEPEVWKNWQWQSDMDLLMNGATFNTSGSPITTQYKKGLLMKPRDGTH
VSRLTRHAGALNCFVGLPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagtgcatcaaaggttgtgttctccctgttggtgactttggccattaccatc
ccatgcctggaggctggcattgctgaatttgatgactttctcaaagctcaatctgagaaa
gctcacaaaatcgctcttgagtcctatgtaccaacacccgagttcgtcgccagtgaactg
aattaccacgtccatctttcaatgctgaacagcacaaggaggggattgaaggcagggaac
aatgacgccggagcgccttgtgacagcagcaaccccattgacaactgctggaggtgcaac
aaagactgggccaatgacaggtacaggctagccaaatgcggaaaagggttcggaagacgt
gcagtcggaggcctcggtggacccatctatgtggtcactgataattccgatgaggacatg
gttaaccccaaagaaggaaccctccgatatggtgtcactcaaaagggtccattgtggatc
accttcgcacgcagcatgatcatcactcttcaacaggagctgttgatttcctccgacaag
accatcgatggtcgtggcgccaacgttcagatcagggatggtgctggcctcactatgcaa
ttcgtgaacaacgttatcatccacgggattcgcgtgaagaacattgtgtctaaggagggt
ggcatgatcagggactcttacaaccacgttggactgagaaccaggagtgatggtgatgcc
atctccgttttcggtgcctccaacatctggatcgatcatgtttccctctctaactctgat
gacggacttatcgatgtcatccaaggctccactgccatcaccatctctaactgccacatg
accagacataacgacgtgatgctgtttggtgctactgatacctattctggagacaagatc
atgcagattacagtggcattcaaccacttcgggcagggactgatccagaggatgccaagg
tgcagaatgggattctttcacgttctgaacaacgattacactcactggatgatgtacgca
ataggaggaagcgcagcaccaaccattctgagccagggaaaccgattcattgccccgaac
aacgacgctgcaaaggagataacgcacagggtcgatgcagaaccagaagtgtggaagaac
tggcagtggcaatcagacatggacctattgatgaatggtgccacgttcaacacttcaggg
tcaccaataacgacgcaatacaagaagggtctcctaatgaagccaagagacggcactcac
gtcagcaggcttacacggcatgctggtgccctcaactgctttgttgggttgccttgctag
DBGET
integrated database retrieval system
