Phaseolus vulgaris (common bean): 137823929
Help
Entry
137823929 CDS
T03093
Name
(RefSeq) zinc finger CCCH domain-containing protein 4-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137823929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137823929
Spliceosome [BR:
pvu03041
]
Complex B
Other components
Prp19-related factors
137823929
Complex C
137823929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_12
zf-CCCH_3
zf-CCCH_10
RRM_occluded
RRM_YTH1
zf-CCCH
zf-CCCH_4
zf-CCCH_PARP12
RRM_3
Motif
Other DBs
NCBI-GeneID:
137823929
NCBI-ProteinID:
XP_068485378
LinkDB
All DBs
Position
8:complement(62327374..62331030)
Genome browser
AA seq
484 aa
AA seq
DB search
MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTRAEYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALHIDSNDAIPKSDVNREYFAE
EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMATLEAPEDESIKTLYVGGLDARVT
EQDLRDNFYAHGEIESIKMVLQRACAFVSYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQTSKPESDGSDQARQQSSVAHSGLLPRAVISQQQNQDQTQGTLFYNNPPPMQQERSYYP
SMDPQRMGALISSQDGPPGGPSGSGENKSSLEKQPMQHYARPMMPPPPGQYHHQYYSPYG
YMPPVPPYQQYPPPPYNTAAPSQPPAANHPYQHSTQPVSSQTGSVQAAHAPTESGTSTSG
SQQQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaggttgctcagagaccacgaagccgacggttgggaacgttctgatttcccc
atcatctgcgaatcctgcctcggcgacagcccctatgttcgaatgacaagagcagagtat
gacaaggagtgcaagatttgtacacggccattcactgtgtttagatggagaccaggtaga
gatgcgagatacaagaaaactgagatatgtcagacatgtagtaaattgaaaaatgtctgt
caagtgtgccttctggaccttgaatatggactaccggttcaagtccgagacacagctctc
catattgattccaatgatgccattccaaagagtgatgttaatagggagtattttgctgaa
gagcatgaccgtaaggctagagctggtatagattatgaatcttcttttggaaaagcacgt
cctaatgatactatcctgaagcttcaaagaacaactccatattacaaaagaaaccgggcg
catatttgcagtttctacataaggggtgaatgtaccagaggagccgagtgcccttataga
cacgagatgccagaaactggggaattgtctcaacaaaatattaaagatcgttattatggg
gtgaatgatccagtggccttgaagctacttggcaaggcaggggagatggccactctggag
gctcctgaggatgagagcattaaaactctctatgttggtggacttgatgctagggtcact
gagcaggatttgcgggataacttctatgctcatggagaaattgaatctataaaaatggtt
ctgcaacgggcttgtgcttttgtatcatatactacccgagaaggcgcagaaaaggcagca
gaagaactctcgaacaaactggttattaagggcctaaggctaaagctgatgtggggcagg
cctcagacatcaaaacctgagtcagatggctctgatcaagctaggcagcagtcatctgtg
gctcatagtggattgttgcctcgggcagttatatcacagcagcagaaccaggaccaaact
caaggaacacttttctataacaatccaccacctatgcagcaggaaagaagctactacccg
tcaatggatcctcaaagaatgggtgcccttatttcatctcaagatggtcctcctggtggg
ccttctgggtcgggggagaacaagtccagtttggagaagcagccaatgcaacactatgcc
cgtccaatgatgcctcctccccctggccaatatcaccatcagtattactctccatatggt
tatatgccgccagttcccccttatcaacagtacccaccacctccatacaatactgccgct
ccatcccagccgccggctgcaaatcatccttatcagcattctacgcaaccagtgtcttca
cagacagggtctgtacaggctgcacatgccccaactgaatctggaacatcaacatcgggg
tcacagcagcaatga
DBGET
integrated database retrieval system
